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Protein Overview: slx4

General Information:
Name(s) found: slx4 / SPAC688.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • structure-specific endonuclease subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Slx1-Slx4 complex [IDALink to PubMed article]
    nucleolar chromatin [IDALink to PubMed article]
    Biological Process: replication fork processing at rDNA locus [TASLink to PubMed article]
    DNA-dependent DNA replication [ISS]
    replication fork processing [TASLink to PubMed article]
    maintenance of rDNA [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    endonuclease activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEEYIEVS SSPDIFTDDD DMITIEPELN KNPKDCNSKR KRSVTECCEI RLITSKCDFE  60
   61 STQQLVHHNC TGHKVHEHNL NAVDEEDFDT ENLPLLFSSF SDNESDILEP DLNTRVAEDN 120
  121 DVLLSRYSKI KNSASCRNTF EHSAYHSNRE EISSSGFYYH RKPQLFEKSL EKLGNKSIEA 180
  181 NRSPLIKELC ESANSTENVC FSVSTVDEIQ QRHPSAGHSI DSTCQSNSFL EGDSATHKKK 240
  241 KTDNIKEFTS CEFNDRSRTL LNYAGYMDTN KNADNEAKSL KEKLENFPVE KLRAIAESYG 300
  301 FKSSDSKATL IKIVESCLDA IDSRSQSKKL GKETPHDYLI TSTKTVLEFD DIVTQTHRAI 360
  361 SQVVKQAKDN SVWIKILTYS AIDVEEFQLW LKRKNLNVSL DLIKSWCDKY GVLMKGSWH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] deduced N/A No confident structure predictions are available.
    2 View Details [218..334] deduced N/A No confident structure predictions are available.
    3 View Details [335..419] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle