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View Structure Prediction Details

Protein: slx4
Organism: Schizosaccharomyces pombe
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for slx4.

Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEEYIEVS SSPDIFTDDD DMITIEPELN KNPKDCNSKR KRSVTECCEI RLITSKCDFE  60
   61 STQQLVHHNC TGHKVHEHNL NAVDEEDFDT ENLPLLFSSF SDNESDILEP DLNTRVAEDN 120
  121 DVLLSRYSKI KNSASCRNTF EHSAYHSNRE EISSSGFYYH RKPQLFEKSL EKLGNKSIEA 180
  181 NRSPLIKELC ESANSTENVC FSVSTVDEIQ QRHPSAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSIDSTCQSN SFLEGDSATH KKKKTDNIKE FTSCEFNDRS RTLLNYAGYM DTNKNADNEA  60
   61 KSLKEKLENF PVEKLRAIAE SYGFKSSDSK ATLIKIVESC LDAIDSRSQS KKLGKET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [335-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHDYLITSTK TVLEFDDIVT QTHRAISQVV KQAKDNSVWI KILTYSAIDV EEFQLWLKRK  60
   61 NLNVSLDLIK SWCDKYGVLM KGSWH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle