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Protein Overview: SPBC646.15c

General Information:
Name(s) found: SPBC646.15c [Sanger Pombe]
Description(s) found:
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  • pir||T40591 hypothetical protein SPBC646.15c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74627020|sp|O94516.1|PEX16_SCHPO RecName: Full=Peroxisomal membrane protein PEX16; Short=Peroxin-16 [NCBI NR]
  • gi|4160351|emb|CAA22819.1| Pex16 family peroxisome import protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112165|ref|NP_595373.1| Pex16 family protein [Schizosaccharomyces pombe] [NCBI NR]
  • Pex16 family protein [Sanger Pombe]
  • Peroxisomal membrane protein PEX16 OS=Schizosaccharomyces pombe GN=pex16 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: O94516; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBC646.15c protein [4896.FASTAC]
  • |||hypothetical protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein; sequence orphan [Schizosaccharomyces pombe]gi|4160351|emb|CAA22819.1| sequence orphan [Schizosaccharomyces pombe]gi|7491707|pir||T40591 hypothetical protein SPBC646.15c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94516) Hypothetical protein [pompep4896_normal_reversed]
  • |||Pex16 family peroxisome import protein|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC646.15c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC646.15c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: peroxisomal membrane [ISSLink to PubMed article]
    Biological Process: protein import into peroxisome membrane [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLAYYEDQ LLKDEKSFLK VTEIERLLSY AAYLLPAEFR DDQLKSQTIT SILLLLHQFH  60
   61 TGLLFRKIAE LPKTEQAILK SERTQYLEYF RKKNPSFEKV SELLYFLNIS TFPIELVISK 120
  121 YNPSRQFLLR VHIMWTTGGD LPLSNPVLQR DFNVKTFIHL HKKYSNSGSA VVLKNSKKVV 180
  181 PRLNTVNSSL DFLQNRTPRL SSILPDEIFT KRLPNLRIFS NFIKVCRPLI YMLFMWHWKR 240
  241 KQKSSSLKVR PWGPWIVAFV FEVISQLIDR RCESATSSRQ GFGLERRTNQ SQFQHFVVWA 300
  301 FTQGRFYDEF TKHWINRSLS WVNSIPVFGK YLLLSVEERQ KSLENYISSE TIKEALMTRT 360
  361 YRNPFLIYLT RCFSLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] MSA 1.027959 View MSA. No confident structure predictions are available.
    2 View Details [162..376] MSA 2.028992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle