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Protein Overview: SPBC4.03c

General Information:
Name(s) found: SPBC4.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • COPII-coated vesicle component Sfb3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 891 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    endoplasmic reticulum [ISSLink to PubMed article]
    COPII vesicle coat [ISSLink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [ICLink to PubMed article]
    late endosome to vacuole transport via multivesicular body sorting pathway [NAS]
    Molecular Function: zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYPGQFGNY GNPETYRQNV AGNIASYGGP EIDTQLAAQM NAQMYIQQGS AMAPQPRRAR  60
   61 RHKDAHAYDM SLTDAEPALA PVMSPAIPPS MNYPTPSTPS VLPESFSNDT NLLDPAALPS 120
  121 APEVRYEDQQ LFKNQIFNTM EKGSPPMSTT DFVGYEQGNS SSKFVQFTSY AIPATNDVCN 180
  181 ASGIPLGMIV QPFAELRPDE APVPVVDNTN SNPPRCKKCR GYINPFIQFT MASSKWTCNL 240
  241 CGSENSFNDD GFNPLVGSQH DGVESRPELN VGTIDFKVGK DYWIKEDPPK PARFVFMIDV 300
  301 SYEASSKGLP KVAAEAIRNI LYGPVPLDPN VKIAIVCFDR SVNFFNLSPN LEQPHMLAAS 360
  361 DLENPFVPFS SGLFVDPIAS KVVIERLLDS FPAIFQDVKI PEPVVGNALE VVKLLLKETG 420
  421 GKAFVFVSAL PTMGLGKLRH REDQRLYGTS DEKNLWNTQD KWYTSLADEY VTAGIGVDIF 480
  481 FTATAYVDVA TVGSVATLSG GQIYHYSNFV ADRDGSRLKQ DLFRSVTREQ GYRVMLKTRC 540
  541 SNGLRVSKYL GNFLQRTPQD IEFGSLDADK SVTVLFSYDG KLNGALDAHF QTAVLYTTPS 600
  601 GERRVRVVNY CCAVTSKSYD TISLAIVEPI VAVLAKIAST NIAAGSLKDT SVRLVEGVVK 660
  661 ILSSYRKVAA NRLTPGQLVL PKNLVLLPIL ILAVLKSSAI RSGSIHSDIR VSQLREVRAA 720
  721 PIQELMLNLY PNIYALHQLQ PTDCLPDPEN TGCLPINMPL CVRASRKFIE DGGAFLIVTG 780
  781 QKSYLWFHQR TSPLLLQDLL GVESLEDIDS LKALELPTLD TVLSVQVRNL LSSLRMQFPS 840
  841 MALHPQIVRQ GLDGSEGEIF STLVEDNTRE GFGYLDFLTK IHESLHTQGY K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 4.0 No description for 1y0fA was found.
    2 View Details [134..891] PSI-BLAST 1000.0 No description for 2nupB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle