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Protein Overview: SPAC1039.06

General Information:
Name(s) found: SPAC1039.06 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • alanine racemase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: fungal-type cell wall organization [ISSLink to PubMed article]
    Molecular Function: alanine racemase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNVDKFSS RFYLNVNKEE LKKEYVGKTI QQVPTPGFVI DEAIFEKNCN RMLDRASDIG  60
   61 VTFRAHVKTH KTIEGTLLQL GDGRTKAVVV STLMEGFSLI PLILEGKIDD LLYGLPVAKS 120
  121 RLPELYELSK IVPHLRLMID NPKQLDILRE FTSTLPDDAK PWSIFVKIDM GTHRAGVTND 180
  181 SQVVKDLIST ILSDKSLFDL FGFYCHAGHS YASRSIDAAS EFLCAEIDAA NTAAKFATSI 240
  241 DPSLKLTLSV GATPTAHSVS PKVKELLPTL SGKLEVHAGN YPMNDVQQMI TKCISQADVA 300
  301 DYVFAEVISN YPGRNGEPGE VLVNAGVIAM SRETSPEGDF GIVITPGFES FYVDRLSQEH 360
  361 GILKSKDPKA TLPDASQVLC IIPNHSCITA AAFPWYYITK GSDVITDIWV PWKGW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 49.522879 The 1.9 A crystal structure of alanine racemase from Mycobacterium tuberculosis contains a conserved entryway into the active site


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle