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Protein Overview: SPCC306.07c

General Information:
Name(s) found: SPCC306.07c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • U3 snoRNP-associated protein Cic1/Utp30 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: ribosomal large subunit biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITSEKKKN LKSLDKIDIK LLEKTIRALL QHIRSSDKPI EKEKVYIQVN TFQPVEKESL  60
   61 RRPSKVFLPH RIMHVTDACL IVKDSQQTYQ DLVEQQGLDE VITKVLSIPR LKLKYKTIRE 120
  121 KCELRDSHNL FLVDDRVLKY IPLLMGKVFE QKKIKPFPIS VLQKKETLRN QVARCLHSTY 180
  181 LKLSAGTSHT ILCGLATQTN EQLLENITTV LKCLLTNFIP KGWSAIDNVA IKTADSASLP 240
  241 IWTSDTNLAA HKRHIVHIQD ARPLKKSELR AQKRGSSGEG KGNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 62.0 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  5.5584586460628 bayes_pls_golite062009
  • structural molecule activity
    		•  5.37298418570526 bayes_pls_golite062009
  • binding
    		•  1.16685426269427 bayes_pls_golite062009
  • protein binding
    		•  0.103931839048358 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle