YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC18.09c

General Information:
Name(s) found: SPCC18.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • conserved eukaryotic protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 232 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA repair [ISSLink to PubMed article]
    Molecular Function: nucleotide binding [NASLink to PubMed article]
    DNA binding [IEA]
    hydrolase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVHKTNDAF KVLMNSAKEP IVEDIPKKYR KQSFRDNLKV YIESPESYKN VIYYDDDVVL  60
   61 VRDMFPKSKM HLLLMTRDPH LTHVHPLEIM MKHRSLVEKL VSYVQGDLSG LIFDEARNCL 120
  121 SQQLTNEALC NYIKVGFHAG PSMNNLHLHI MTLDHVSPSL KNSAHYISFT SPFFVKIDTP 180
  181 TSNLPTRGTL TSLFQEDLKC WRCGETFGRH FTKLKAHLQE EYDDWLDKSV SM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 36.39794 Protein kinase C inhibitor-1, PKCI-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.12315862086587 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.724655038971066 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.666122982208826 bayes_pls_golite062009
  • transferase activity
    		•  0.403872263530178 bayes_pls_golite062009
  • catalytic activity
    		•  0.096119422680995 bayes_pls_golite062009
  • protein binding
    		•  0.0635855651106229 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle