YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC645.10

General Information:
Name(s) found: SPCC645.10 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • ATP(CTP) tRNA nucleotidyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: tRNA modification [ISSLink to PubMed article]
    Molecular Function: tRNA adenylyltransferase activity [ISSLink to PubMed article]
    ATP binding [IEA]
    RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSRIVLNDV EKKVVNLLKK TADFIESKSS SSSSLEVRLA GGWVRDKLLG LSSDDLDVTL  60
   61 NKVTGVDFAN SIFEYVHSLD SDSVIPYKDA LGKLTVNPDQ SKHLETATLS LFDLDIDFVG 120
  121 LRAESYDDKS RIPSVTPGTV ETDALRRDFT VNTLFFNIRT EKIEDITKRG YKDLQTKVLV 180
  181 TPISPLQSFL EDPLRILRGI RFASRFEFTI DPSVVSAIQD PKVCKAFEKK VSKERVGEEI 240
  241 EKMLKGANAK LALQLLYSTN TYQFTFDTLP AEKEFQIPKA LEATESLFQS LALTFPKLMK 300
  301 LSEDEKIGLW LYVALIPWSS QTVMVKKKQF YIPAIIAKDK LKLRSTYVNQ LNQCCTFNPI 360
  361 FDELVNDTST KNCSSIGSLI RQLNKSWEVV FLTSVIYSCC KTPAASVSNT FSSYKSLYDF 420
  421 IYDKNLQNAY NMKPLLDGKQ IMKNVGVKPG PQLKETMDNM ISWQFKHPEG SVEDCVAYLQ 480
  481 SLKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 65.522879 tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring phosphorus-containing groups
    		•  2.63905617158862 bayes_pls_golite062009
  • transferase activity
    		•  2.28535908015265 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  2.17198033243932 bayes_pls_golite062009
  • tRNA binding
    		•  1.96218336722441 bayes_pls_golite062009
  • RNA binding
    		•  1.77578561123536 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.43322212500405 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  1.24026612395993 bayes_pls_golite062009
  • tRNA nucleotidyltransferase activity
    		•  1.05100814747368 bayes_pls_golite062009
  • DNA binding
    		•  0.920001549206154 bayes_pls_golite062009
  • binding
    		•  0.888087430062829 bayes_pls_golite062009
  • catalytic activity
    		•  0.75232920999699 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle