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Protein Overview: ucp12

General Information:
Name(s) found: ucp12 / SPCC895.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ATP-dependent RNA helicase Ucp1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1327 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    ubiquitin binding [ISSLink to PubMed article]
    ATP-dependent RNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKGKKGKS SEVNLETSKN KEKNIKGKKK NSLDPIEKNK QETAGLQTTS RPTAKQLVGG  60
   61 SSWTGKIPVV LLNEHCQRSK WEKSDVKVRQ TKSKNYIFTS VVLAKKDPKN PSILDHVSLI 120
  121 PPKSYYENGY FPEKETLVEA RNVGAVYALH RIMSHKSLQH ALPPEHRNIW FDMEKQKKEE 180
  181 LKNKHSWLYN EDPFKAAKEL QAARASSAAK PPPKASQKNE KVSLTSIKNT SLSHFSKFNF 240
  241 KYALPIHMSL ENRRSLENLF RNMNTWDILE DTKNLEPDTS IVNDLISLGF RDIHAKEACQ 300
  301 YCVSLEDALE WLIIHVPEDD LPTRFLPSDY TTGISVQNLN SANLAIHYNA KRISETGYSF 360
  361 DLCFSTLQTF ENNIQISSEY LQQHLIGESF DGNISLEPNS TEWDDDVSAL QSILDNKVSK 420
  421 IENGCRVRID YPTSEFGELF VDFRRPARSY PAHIPLMSLS STKRMASYIK LSILKKMVVY 480
  481 AMDLRGECML SWLYNHLQEN IEDFLQNIGS LLNISAATIG VSLSSQNKSA PTAKKNNSFK 540
  541 PKLFRRSREL SEKLCNNWSE RVKSPSYQLK VREREKLPAW ESRRKIMDAI QHSQVVVISG 600
  601 ETGSGKSTQV VQFILDHYLS SGEKDLQTVV CTQPRRISAI SLAERVAFER DTTVGKEVGY 660
  661 SVHGEKSISK ETLLEFCTTG LLLRRIQQHG LGFLSTLSCV VVDEVHERSI ENDILLTLLK 720
  721 LVISRIPNLK VILMSATVNS DTFKYYFGNA GHLHIHGRTF PIKDYYIEDF APKLNEDDDE 780
  781 EDVPRRKKKE YEIDYHLISR LVSSIDAELG SSSGSILVFL PGVSNIARCI REIKSKDGSK 840
  841 FEVLPLHASL NTSEQRRCFK TYTKRKIICA TNIAETSITI DDVVAVIDSG RVKQIDYDVE 900
  901 RDLVTFKETW ASRAACQQRR GRAGRVKKGI CYKLYTRGFE EKGMLGQTPP EVLRTALSQV 960
  961 CLNVVPLVKR FSSAGNSVNQ GSIKKFMNSL IDPPNDATVD LALKKLIQVG ALTVSEDLTG1020
 1021 LGEYLVSLPI DLKLGKLLVF GSIFGYLEPA LTITAILSTK SPFLGDDEAR EIRSKQSQGW1080
 1081 GDVLADARVY HNWLEILETR GVKKTVQWCE EMHLHYTTLQ QIRQNRNELS EAAQLLELTT1140
 1141 KKLTGNFDWY STENLTVLST LIAAALSPNV VKCVYPDKKF VASFSGSLEM EQEARLTKFY1200
 1201 DQNNQRLFIH PSSTMFVNSP NASRCTFVAY EQKVETTKPF LRNCTPINTY GMILLGANDI1260
 1261 LIDPLGKGLI LDQAYCIKAW PKVVILLKML KRCLDASLHE RLESSSGLNY ESEIHQCIRT1320
 1321 LIAGNGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] MSA 1.040991 View MSA. No confident structure predictions are available.
    2 View Details [107..423] PSI-BLAST 5.39794 Heavy meromyosin subfragment
    3 View Details [424..544] FFAS03 4.01 No description for 2ebmA was found.
    4 View Details [545..976] PSI-BLAST 60.69897 No description for 2j0uA was found.
    5 View Details [977..1147] MSA 1.999971 View MSA. No confident structure predictions are available.
    6 View Details [1148..1327] MSA 1.530964 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle