| Protein: | ucp12 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ucp12.
| Description | E-value | Query Range |
Subject Range |
|
|
791.0 | [0..10] | [1327..38] |
|
|
772.0 | [0..10] | [1327..16] |
|
|
762.0 | [0..12] | [1327..42] |
|
|
735.0 | [0..9] | [1327..4] |
|
|
734.0 | [0..44] | [1327..38] |
|
|
733.0 | [0..3] | [1327..26] |
|
|
724.0 | [0..2] | [1326..11] |
|
|
667.0 | [0..1] | [1322..1] |
|
|
666.0 | [0..28] | [1327..44] |
|
|
653.0 | [0..8] | [1327..4] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MGSKGKKGKS SEVNLETSKN KEKNIKGKKK NSLDPIEKNK QETAGLQTTS RPTAKQLVGG 60
61 SSWTGKIPVV LLNEHCQRSK WEKSDVKVRQ TKSKNYIFTS VVLAKK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-423] |
1 11 21 31 41 51
| | | | | |
1 DPKNPSILDH VSLIPPKSYY ENGYFPEKET LVEARNVGAV YALHRIMSHK SLQHALPPEH 60
61 RNIWFDMEKQ KKEELKNKHS WLYNEDPFKA AKELQAARAS SAAKPPPKAS QKNEKVSLTS 120
121 IKNTSLSHFS KFNFKYALPI HMSLENRRSL ENLFRNMNTW DILEDTKNLE PDTSIVNDLI 180
181 SLGFRDIHAK EACQYCVSLE DALEWLIIHV PEDDLPTRFL PSDYTTGISV QNLNSANLAI 240
241 HYNAKRISET GYSFDLCFST LQTFENNIQI SSEYLQQHLI GESFDGNISL EPNSTEWDDD 300
301 VSALQSILDN KVSKIEN
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-544] |
1 11 21 31 41 51
| | | | | |
1 GCRVRIDYPT SEFGELFVDF RRPARSYPAH IPLMSLSSTK RMASYIKLSI LKKMVVYAMD 60
61 LRGECMLSWL YNHLQENIED FLQNIGSLLN ISAATIGVSL SSQNKSAPTA KKNNSFKPKL 120
121 F
|
| Detection Method: | |
| Confidence: | 4.01 |
| Match: | 2ebmA |
| Description: | No description for 2ebmA was found. |
|
Region A: Residues: [545-976] |
1 11 21 31 41 51
| | | | | |
1 RRSRELSEKL CNNWSERVKS PSYQLKVRER EKLPAWESRR KIMDAIQHSQ VVVISGETGS 60
61 GKSTQVVQFI LDHYLSSGEK DLQTVVCTQP RRISAISLAE RVAFERDTTV GKEVGYSVHG 120
121 EKSISKETLL EFCTTGLLLR RIQQHGLGFL STLSCVVVDE VHERSIENDI LLTLLKLVIS 180
181 RIPNLKVILM SATVNSDTFK YYFGNAGHLH IHGRTFPIKD YYIEDFAPKL NEDDDEEDVP 240
241 RRKKKEYEID YHLISRLVSS IDAELGSSSG SILVFLPGVS NIARCIREIK SKDGSKFEVL 300
301 PLHASLNTSE QRRCFKTYTK RKIICATNIA ETSITIDDVV AVIDSGRVKQ IDYDVERDLV 360
361 TFKETWASRA ACQQRRGRAG RVKKGICYKL YTRGFEEKGM LGQTPPEVLR TALSQVCLNV 420
421 VPLVKRFSSA GN
|
| Detection Method: | |
| Confidence: | 60.69897 |
| Match: | 2j0uA |
| Description: | No description for 2j0uA was found. |
|
Region A: Residues: [977-1147] |
1 11 21 31 41 51
| | | | | |
1 SVNQGSIKKF MNSLIDPPND ATVDLALKKL IQVGALTVSE DLTGLGEYLV SLPIDLKLGK 60
61 LLVFGSIFGY LEPALTITAI LSTKSPFLGD DEAREIRSKQ SQGWGDVLAD ARVYHNWLEI 120
121 LETRGVKKTV QWCEEMHLHY TTLQQIRQNR NELSEAAQLL ELTTKKLTGN F
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1148-1327] |
1 11 21 31 41 51
| | | | | |
1 DWYSTENLTV LSTLIAAALS PNVVKCVYPD KKFVASFSGS LEMEQEARLT KFYDQNNQRL 60
61 FIHPSSTMFV NSPNASRCTF VAYEQKVETT KPFLRNCTPI NTYGMILLGA NDILIDPLGK 120
121 GLILDQAYCI KAWPKVVILL KMLKRCLDAS LHERLESSSG LNYESEIHQC IRTLIAGNGV 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
