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Protein Overview: SPBC3B8.09

General Information:
Name(s) found: SPBC3B8.09 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • U3 snoRNP-associated protein Utp3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    nucleolus [IDALink to PubMed article]
    small nucleolar ribonucleoprotein complex [ISSLink to PubMed article]
    Biological Process: maturation of SSU-rRNA [ISSLink to PubMed article]
    Molecular Function: snoRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKSRSSS TRKGSSLKVP EIKEKEKINA INTYEDVANS EDEFYNAQDK ILFDADNGEQ  60
   61 ADELELSDEE LVALESSSDE EDGNAEENLS ENEELSGKKK DAVNEEELYD NKGWGRSAKS 120
  121 YYGGDDYDNE DYSEEDDEFD ARMEEQEALR LQRKRLEKVS ETDAIDDISQ WADNSDLKSI 180
  181 KQDSSAAAIE ELVQQISPDL PRTELLKILE AKHPEFQLFL DELNQLKPQL NEIKEKLKTY 240
  241 PSSQLLQAQC TALSTYISFL TFYFALLKDG EEDLKNHPIM VDLVRCKQTW ESYCGLDEVL 300
  301 TPTSLEEDGK TIELHEKIAS ASDIGASEDE EDVDMHESIS DNENEGIKDI PVAEDDDITL 360
  361 KFRAAKSKIN TNIKNLDDYG EGNRLDDVDA EDKIARKRSL KFYANQIDQK AAKRSRAVLE 420
  421 LSGDLDMPYK ERRFERQQRL MREAAARGRN QDAGADLDDE DPESMGIPAN VDREVEDQDD 480
  481 LDYYESLDKK SKMAKKLRKE NHDLERDLIR ASRHPELIEL GEGDKRGITL DIAKNRGLTP 540
  541 RRPKENRNPR LKKRMRYEKA KKKLASKKAI YKGAPQGGYA GEQTGIKAGL VKSIKLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 7.221849 Heavy meromyosin subfragment
    2 View Details [399..597] MSA 2.315996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle