| Protein: | SPBC3B8.09 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 597 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC3B8.09.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..50] | [564..1883] |
|
|
228.0 | [0..22] | [564..986] |
|
|
217.0 | [0..22] | [570..1845] |
|
|
216.0 | [0..22] | [564..1522] |
|
Region A: Residues: [1-398] |
1 11 21 31 41 51
| | | | | |
1 MARKKSRSSS TRKGSSLKVP EIKEKEKINA INTYEDVANS EDEFYNAQDK ILFDADNGEQ 60
61 ADELELSDEE LVALESSSDE EDGNAEENLS ENEELSGKKK DAVNEEELYD NKGWGRSAKS 120
121 YYGGDDYDNE DYSEEDDEFD ARMEEQEALR LQRKRLEKVS ETDAIDDISQ WADNSDLKSI 180
181 KQDSSAAAIE ELVQQISPDL PRTELLKILE AKHPEFQLFL DELNQLKPQL NEIKEKLKTY 240
241 PSSQLLQAQC TALSTYISFL TFYFALLKDG EEDLKNHPIM VDLVRCKQTW ESYCGLDEVL 300
301 TPTSLEEDGK TIELHEKIAS ASDIGASEDE EDVDMHESIS DNENEGIKDI PVAEDDDITL 360
361 KFRAAKSKIN TNIKNLDDYG EGNRLDDVDA EDKIARKR
|
| Detection Method: |  |
| Confidence: | 7.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [399-597] |
1 11 21 31 41 51
| | | | | |
1 SLKFYANQID QKAAKRSRAV LELSGDLDMP YKERRFERQQ RLMREAAARG RNQDAGADLD 60
61 DEDPESMGIP ANVDREVEDQ DDLDYYESLD KKSKMAKKLR KENHDLERDL IRASRHPELI 120
121 ELGEGDKRGI TLDIAKNRGL TPRRPKENRN PRLKKRMRYE KAKKKLASKK AIYKGAPQGG 180
181 YAGEQTGIKA GLVKSIKLQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
