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Protein Overview: rnh1

General Information:
Name(s) found: rnh1 / SPBC336.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ribonuclease H Rnh1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article][IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    inclusion body [IEA]
    Biological Process: RNA catabolic process [ISS]
    Molecular Function: magnesium ion binding [IEA]
    ribonuclease H activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGNKRAYYA VARGRNTGIY STWDEASDQV KGYGGNRYKK FDSYEAAQEF CRTEGSRYSS  60
   61 SSGPYRRSTT SYGYSPYSSS SSNYSARHSD KYRKKISRSY STEKDIEIFS NDTHEKSIAC 120
  121 SDRQVVYADG SSLRNGKKGA VAGCGVFFGN DDPRNISVPL AGEEQTNNRA ELQAIILALE 180
  181 NTSGDLTIRS DSNYSIKSLT TWLPKWKKND FKTSNSQPVK NLDLINRASD LMSDRNVSLE 240
  241 YVKGHSTDYG NQQADMLARR GASE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 45.0 No description for 2iajA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle