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View Structure Prediction Details

Protein: rnh1
Organism: Schizosaccharomyces pombe
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rnh1.

Description E-value Query
Range
Subject
Range
gi|38347303, gi|... - gi|50931015|ref|XP_475035.1| OSJNBa0042F21.5 [Oryza sativa (japonica cultivar-group)], gi|38347303|e...
222.0 [0..14] [263..1263]
gi|116309829 - gi|116309829|emb|CAH66866.1| H0307D04.11 [Oryza sativa (indica cultivar-group)]
222.0 [0..14] [263..1330]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGNKRAYYA VARGRNTGIY STWDEASDQV KGYGGNRYKK FDSYEAAQEF CRTEGSRYSS  60
   61 SSGPYRRSTT SYGYSPYSSS SSNYSARHSD KYRKKISRSY STEKDIEIFS NDTHEKSIAC 120
  121 SDRQVVYADG SSLRNGKKGA VAGCGVFFGN DDPRNISVPL AGEEQTNNRA ELQAIILALE 180
  181 NTSGDLTIRS DSNYSIKSLT TWLPKWKKND FKTSNSQPVK NLDLINRASD LMSDRNVSLE 240
  241 YVKGHSTDYG NQQADMLARR GASE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 2iajA
Description: No description for 2iajA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle