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Protein Overview: fsv1

General Information:
Name(s) found: fsv1 / SPAC6F12.03c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • SNARE Fsv1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    Golgi trans cisterna [IDALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: intracellular protein transport [RCALink to PubMed article]
    Golgi to vacuole transport [IMPLink to PubMed article]
    Molecular Function: SNAP receptor activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLLLIIDS VSQKIRDRRK LEEFGQNPDE EIESSLKDVR QELQKLNEEQ SRLEKNAQIP  60
   61 EYRVRESEAF LIRMQRRLES AEEEFEKQRR ASSIPADGTS AFSANPQVAS TNNKLTPLPS 120
  121 LQKTTSSSEG SDIEMEAMYP VDGNDPDPIN VNVLAQMHQQ MLNEQEESLG GIEASVQRQK 180
  181 RMGYAMNTEL SEQNVLLDNM NNDADRIERR FDHAKNRLNK VSRKAKQYPR CFIILLLCAL 240
  241 LLLVASI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 24.69897 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNAP receptor activity
    		•  2.83778981988519 bayes_pls_golite062009
  • protein binding
    		•  2.01524199895183 bayes_pls_golite062009
  • binding
    		•  1.88170908543488 bayes_pls_golite062009
  • phosphatidic acid binding
    		•  1.2325994081843 bayes_pls_golite062009
  • protein transporter activity
    		•  0.60076463356515 bayes_pls_golite062009
  • transporter activity
    		•  0.487715383686856 bayes_pls_golite062009
  • SNARE binding
    		•  0.44377480710212 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0443963926233321 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle