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Protein Overview: SPAC2C4.12c

General Information:
Name(s) found: SPAC2C4.12c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • tRNA 2'-phosphotransferase Tpt1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    Biological Process: tRNA splicing, via endonucleolytic cleavage and ligation [ISSLink to PubMed article]
    Molecular Function: tRNA 2'-phosphotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSHELIEES NNSGTPATKS SSKPTKKIRP RNDLVHYSKA LSKVLRHTAK ANGLQIREDG  60
   61 YIEVDSILKL PQFRGMGMEL LLSIVKGNDK KRFTMEEVEG VLYIRANQGH SIKAVQVPMA 120
  121 RIDNASSIPK VVHGTKKELW PVISKQGLSR MKRNHIHCAT GLYGDPGVIS GIRKSCTLYI 180
  181 YIDSAKAMQD GVEFYRSENG VILTEGVNGL LSSKYFSRVE TSDGEVLLDA KASPKNNRSD 240
  241 ESDQSDPESI DPFCDNLQAL SMHELELLEE KHSNFGYSEG IIKGKMQVAQ SGFDDGFKHG 300
  301 SRLGFQMGKT IGTLKAKLYI FEENEQMEIL KQELDRLQES AEFHIFVANH KEEILKCIRE 360
  361 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 53.09691 Crystal Structure of APE0204 from Aeropyrum pernix
    2 View Details [233..361] MSA 49.059997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle