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Protein Overview: SPAC1039.05c

General Information:
Name(s) found: SPAC1039.05c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • conserved fungal protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 781 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spindle [IDALink to PubMed article]
    Biological Process: transcription [IEA]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKAKKSRAY QEGDIRYKCD FQGCTKSFTR KEHARRHFRS HTNSKAFICP HCSSSFTRSD  60
   61 VLNRHVNQKH VKQNDAGSQT HPKHDKTLIS SSDQELPFPS YVEADVQDAA YTDLKSHIDQ 120
  121 PILPDQPIIS DNFNEGLQSA IAQTGNNYMF TTSRRNNSIS GSITIPESDQ QINLQNKFLS 180
  181 TPSIKNNANK SLSPQDSISI FGTSPFNAYQ QNTDNFVCWL FDNMEKDAPT ESVSNFTDGI 240
  241 NAKQLNLMPV LDSPTIDFLS SHFRVDDKLV AKDLLSLSAY SSLIQVMNNN YQLSEEALQY 300
  301 ITRSRVNLWI AHYWKDFHPR WPFLHRGTLK VDEAPVELLL AMITMGMHFV GDAFAYSIAV 360
  361 SIHSTLRFSI YTHPDFKPPA SLWVYQALLI AEIFEKMTST VEQHNLSQIF HGVTIESMQN 420
  421 GLSSKDTVTE KIPKNMTGTN IAQHKWHQWV DREASKRIAF FSFVLDSQHV ILFGYRPLID 480
  481 ITSVGLPLLC DEALWNADSY EAWTSLLNEN DPPHFFPVLK MFLTNEHLPP KLSPWNMMIV 540
  541 LHGLTTIGWI LSRENLGIVE NIMQNNGTNL KNWRILLKAS YKFWLRTYRV FFLNNGTLPL 600
  601 NHPYVRGCLA TYELAHISLH TNIVALQTYA KSIVSTSRRL YASTSRYVSA WLASDDSEVS 660
  661 IKHAVDMVEA FLGGDMEYDV QNETGLHRPW CLYVSTLILW AYGYVSDGRC EMLEPGNNDC 720
  721 KSQLNAYLMQ MRTGLSEKAK DHVYVRSKTL PLLKCVIDVL CPARWGLLVD GVRILSKLVQ 780
  781 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 52.69897 No description for 2i13A was found.
    2 View Details [159..236] MSA 6.488993 View MSA. No confident structure predictions are available.
    3 View Details [237..320] deduced N/A No confident structure predictions are available.
    4 View Details [321..488] MSA 1.164993 View MSA. No confident structure predictions are available.
    5 View Details [489..591] deduced N/A No confident structure predictions are available.
    6 View Details [592..781] MSA 1.028993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle