YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1039.05c
Organism:	Schizosaccharomyces pombe
Length:	781 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1039.05c.

Description	E-value	Query Range	Subject Range
gi\|85105627 - gi\|85105627\|ref\|XP_962006.1\| hypothetical protein NCU05242 [Neurospora crassa OR74A] gi\|28923597, gi\|... - gi\|32408235\|ref\|XP_324599.1\| hypothetical protein [Neurospora crassa], gi\|28923597\|gb\|EAA32770.1\| co...	456.0	[0..299]	[781..488]
gi\|6470271 - gi\|6470271\|gb\|AAF13704.1\|AF199437_1 C2H2 zinc finger protein Zas1A [Schizosaccharomyces pombe]	456.0	[0..4]	[779..12]
gi\|88180781, gi\|... - gi\|88180781\|gb\|EAQ88249.1\| hypothetical protein CHGG_04868 [Chaetomium globosum CBS 148.51], gi\|1161...	448.0	[0..297]	[781..398]
gi\|40739361, gi\|... - gi\|67541126\|ref\|XP_664337.1\| hypothetical protein AN6733.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	447.0	[0..297]	[779..465]
gi\|39952267, gi\|... - gi\|39952267\|ref\|XP_363850.1\| hypothetical protein MG01776.4 [Magnaporthe grisea 70-15], gb\|EAA56125....	439.0	[0..299]	[781..496]
gi\|42553296, gi\|... - gi\|46136509\|ref\|XP_389946.1\| hypothetical protein FG09770.1 [Gibberella zeae PH-1], gi\|42553296\|gb\|E...	431.0	[0..3]	[781..86]
gi\|159123317 - gi\|159123317\|gb\|EDP48437.1\| C2H2 finger domain protein, putative [Aspergillus fumigatus A1163] gi\|70986854, gi\|... - gi\|70986854\|ref\|XP_748914.1\| C2H2 finger domain protein [Aspergillus fumigatus Af293], gi\|66846544\|g...	424.0	[0..297]	[779..503]
gi\|73947291 - gi\|73947291\|ref\|XP_541354.2\| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...	413.0	[0..2]	[328..2533]
ZAS1_SCHPO - Zinc finger protein zas1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zas1 PE=2 SV=1 zas1 - zinc finger protein Zas1	403.0	[0..163]	[779..260]

Back

Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKAKKSRAY QEGDIRYKCD FQGCTKSFTR KEHARRHFRS HTNSKAFICP HCSSSFTRSD  60
   61 VLNRHVNQKH VKQNDAGSQT HPKHDKTLIS SSDQELPFPS YVEADVQDAA YTDLKSHIDQ 120
  121 PILPDQPIIS DNFNEGLQSA IAQTGNNYMF TTSRRNNS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.69897
Match:	2i13A
Description:	No description for 2i13A was found.

Predicted Domain #2

Region A:
Residues: [159-236]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISGSITIPES DQQINLQNKF LSTPSIKNNA NKSLSPQDSI SIFGTSPFNA YQQNTDNFVC  60
   61 WLFDNMEKDA PTESVSNF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [237-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDGINAKQLN LMPVLDSPTI DFLSSHFRVD DKLVAKDLLS LSAYSSLIQV MNNNYQLSEE  60
   61 ALQYITRSRV NLWIAHYWKD FHPR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [321-488]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WPFLHRGTLK VDEAPVELLL AMITMGMHFV GDAFAYSIAV SIHSTLRFSI YTHPDFKPPA  60
   61 SLWVYQALLI AEIFEKMTST VEQHNLSQIF HGVTIESMQN GLSSKDTVTE KIPKNMTGTN 120
  121 IAQHKWHQWV DREASKRIAF FSFVLDSQHV ILFGYRPLID ITSVGLPL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [489-591]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LCDEALWNAD SYEAWTSLLN ENDPPHFFPV LKMFLTNEHL PPKLSPWNMM IVLHGLTTIG  60
   61 WILSRENLGI VENIMQNNGT NLKNWRILLK ASYKFWLRTY RVF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6

Region A:
Residues: [592-781]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLNNGTLPLN HPYVRGCLAT YELAHISLHT NIVALQTYAK SIVSTSRRLY ASTSRYVSAW  60
   61 LASDDSEVSI KHAVDMVEAF LGGDMEYDVQ NETGLHRPWC LYVSTLILWA YGYVSDGRCE 120
  121 MLEPGNNDCK SQLNAYLMQM RTGLSEKAKD HVYVRSKTLP LLKCVIDVLC PARWGLLVDG 180
  181 VRILSKLVQL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits