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Protein Overview: SPBC1198.10c

General Information:
Name(s) found: SPBC1198.10c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • asparagine-tRNA ligase Slm5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 441 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: asparaginyl-tRNA aminoacylation [ISSLink to PubMed article]
    mitochondrial translation [RCALink to PubMed article]
    aspartyl-tRNA aminoacylation [IEA]
    Molecular Function: nucleic acid binding [ISSLink to PubMed article]
    ATP binding [ISSLink to PubMed article]
    asparagine-tRNA ligase activity [ISSLink to PubMed article]
    aspartate-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFQLPKTL KSLWHHPHNG ELISINGWVR SIRKLKNVCF AMVSDGTCQQ ALQVVTSPEQ  60
   61 SKKLSYGASV NIEGQLAVSK NAKLGLQQYE LLAEKIKIYG QINDDNYPIQ KKHLTTEMLR 120
  121 QIPHLRLRTA KQGEIFRLRS DSLKALRQFF SSKDFTETNP PIITSSDCEG AGEVFTLTPQ 180
  181 ETHKNKSFER DDQKHFFDRP AFLTVSTQLH LEALALGLSR VYTISPAFRA EQSHTSRHLA 240
  241 EFWMLEAEVA FMTSLSQLTS LMEDMIKYTL NSLMEQNYHR DHWDQLLKPW KCMTYSEAIE 300
  301 ELSAVKKTWK YPPKWGNDLS SEHEKYLCEI LHKTPVFVTD YPQKIKPFYM KSSGPDTVAA 360
  361 VDLLVPQVGE LAGGSLRKDH LDEYKTYPPE LQWYLDLMKY SNAPHGGFGL GIERLIAFLE 420
  421 GENTNVKETI PFPRSVGSIF A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..441] PSI-BLAST 110.0 Aspartyl-tRNA synthetase (AspRS)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle