YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC1347.13c

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..301] PSI-BLAST 56.0 RlmB, C-terminal domain; RlmB, N-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA methyltransferase activity
  • 4.23455016472464 bayes_pls_golite062009
  • methyltransferase activity
  • 3.59960278169345 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 3.51722801996622 bayes_pls_golite062009
  • rRNA methyltransferase activity
  • 3.14976989427746 bayes_pls_golite062009
  • tRNA methyltransferase activity
  • 2.33123191403389 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 2.23755555119187 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
  • 2.14623472760939 bayes_pls_golite062009
  • transferase activity
  • 1.63934797352054 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.0137045454994 bayes_pls_golite062009
  • catalytic activity
  • 0.797300463760338 bayes_pls_golite062009
  • N-methyltransferase activity
  • 0.736216022000293 bayes_pls_golite062009
  • structural molecule activity
  • 0.694233763389628 bayes_pls_golite062009
  • binding
  • 0.650146274744039 bayes_pls_golite062009
  • nucleic acid binding
  • 0.404179021204849 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
  • 0.319046095835882 bayes_pls_golite062009
  • 0.16936231012632 bayes_pls_golite062009
  • snoRNA binding
  • 0.155192244522672 bayes_pls_golite062009
  • protein binding
  • 0.031057919963412 bayes_pls_golite062009
  • rRNA (guanine-N1-)-methyltransferase activity
  • 6.26422903788337E-4 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle