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Protein Overview: SPBC1773.01

General Information:
Name(s) found: SPBC1773.01 [Sanger Pombe]
Description(s) found:
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  • pir||T39666 WD-repeat protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74676209|sp|O94560.1|YGD1_SCHPO RecName: Full=Uncharacterized WD repeat-containing protein C1773.01 [NCBI NR]
  • gi|3850079|emb|CAA21906.1| striatin homolog [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19111908|ref|NP_595116.1| striatin homolog [Schizosaccharomyces pombe] [NCBI NR]
  • striatin homolog [Sanger Pombe]
  • Uncharacterized WD repeat-containing protein C1773.01 OS=Schizosaccharomyces pombe GN=SPBC1773.01 PE=2 SV=1 [Swiss-Prot]
  • WD REPEAT PROTEIN: O94560; [pompepVF.fasta]
  • WD-repeat protein [pompep4896]
  • |||WD repeat protein [pompepnew.fasta]
  • SPBC1773.01 protein [4896.FASTAC]
  • |||WD repeat protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • WD-repeat protein [Schizosaccharomyces pombe]gi|3850079|emb|CAA21906.1| SPBC1773.01 [Schizosaccharomyces pombe]gi|7493717|pir||T39666 WD-repeat protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O94560) WD-repeat protein [pompep4896_normal_reversed]
  • |||striatin homolog|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC1773.01 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • striatin [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |||striatin homolog |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Uncharacterized WD repeat-containing protein C1773.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.01 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: cell cycle arrest in response to pheromone [ISS]
    Molecular Function: calmodulin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSNLSLKRQ DEKRADKEPN LYTLQGVIQY LQYEAFKNER DHNLWEIERA ELKIRVAQLE  60
   61 RERAKLEQSL SFQQRRAEML EKSLRELRKD KNISVKDLDE FHLLDKPAAN NTKADAEACL 120
  121 LKSKNYIKKS LQEIVYLTNM QPNVSWNVLQ EPTRGIKVPK ESNNTQQNNQ FVMEPSQNKG 180
  181 NVNDANFFEV EYARNENMNK LSSSELISDD LLEDEIMKPL SSGESLPKKE EEVTKSPSFT 240
  241 LDDSVASNEQ TLAQLNIESP VDQKKSKAKK KKEQKWTLKF ESDKGTSTQC ITHQPLPGST 300
  301 PSFASGTENG VINVWRLDED SNDNSMGIIK PHLTFYGHEG PVLCVCVPKA THHIFSGGHD 360
  361 GTIRCWSLPA NQTSDSISKI LTGSTIFQGH EDCVWELFCH EVKDNNPILL SLSSDGTVRG 420
  421 WKYTGEQLFK IRCDSKQPLS MSVTDSRIAI AYNDGNVRFY DLDTQILVSQ MRIAGNSAIG 480
  481 NPAVKDRINK IVWKNGNPDR LYSLHENGMV RVFDVKSEEL LAEKSISKVS LTGIAFAVNR 540
  541 PEFAISASDG RVFFLRQDDK LSTLESLPSR EAQEEITDLS DILWINSPVD KLEHLIVGCK 600
  601 ERISVYDRKY LP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 7.045757 No description for 2i1jA was found.
    2 View Details [117..612] PSI-BLAST 47.0 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle