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Protein Overview: rpc25

General Information:
Name(s) found: rpc25 / SPBC2G5.07c [Sanger Pombe]
Description(s) found:
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  • gi|76782157|gb|ABA54849.1| RNA polymerase III subunit Rpc25 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T40164 dna-directed rna polymerase iii subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582844|sp|O94285.1|RPC8_SCHPO RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=RNA polymerase III subunit C25 [NCBI NR]
  • gi|3850072|emb|CAA21883.1| DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112860|ref|NP_596068.1| DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces pombe] [NCBI NR]
  • DNA-directed RNA polymerase III complex subunit Rpc25 [Sanger Pombe]
  • DNA-directed RNA polymerase III subunit rpc8 OS=Schizosaccharomyces pombe GN=rpc25 PE=1 SV=1 [Swiss-Prot]
  • DNA DIRECTED RNA POLYMERASE III SUBUNIT: O94285; [pompepVF.fasta]
  • DNA directed RNA polymerase III subunit [pompep4896]
  • |rpc25||DNA directed RNA polymerase III subunit [pompepnew.fasta]
  • Rpc25 protein (Spbc2g5.07c protein) (EC 2.7.7.6) [4896.FASTAC]
  • |rpc25||localization DNA-directed RNA polymerase III complex (subunit)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • DNA directed RNA polymerase III subunit [Schizosaccharomyces pombe]gi|3850072|emb|CAA21883.1| SPBC2G5.07c [Schizosaccharomyces pombe]gi|7490488|pir||T40164 dna-directed rna polymerase iii subunit - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |rpc25||localization DNA-directed RNA polymerase III complex |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94285) DNA directed RNA polymerase III subunit [pompep4896_normal_reversed]
  • |rpc25||DNA-directed RNA polymerase III complex subunit Rpc25|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • RNA polymerase III subunit Rpc25 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPBC2G5.07c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC2G5.07c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • DNA-directed RNA polymerase III subunit rpc8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpc25 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    DNA-directed RNA polymerase III complex [IDALink to PubMed article]
    Biological Process: transcription initiation from RNA polymerase III promoter [IMPLink to PubMed article]
    Molecular Function: DNA-directed RNA polymerase activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLSRFSDI ISIHPSNFWK PTKEALAEEI HKKYANKVIQ NIGLAICVYD FLKIGEGIIK  60
   61 YGDGSSYMNV VFRLIIFRPF RGEVMLGKIK SCSEEGIRVT ISFFDDIFIP KDMLFDPCVF 120
  121 RPDERAWVWK IEGEDGSEGT ELYFDIDEEI RFQIESEDFV DISPKRNKNA TAITGTEALE 180
  181 SVSPYTLIAS CSRDGLGIPA WWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] PSI-BLAST 40.045757 No description for 2ckzB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle