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Protein Overview: SPBC20F10.08c

General Information:
Name(s) found: SPBC20F10.08c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • conserved eukaryotic protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 747 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDANQKLLDF AKLLNQKNDS RPVIEKLKDN ISGDLLNYFL NLLEEISKLD TDQPLSVTSL  60
   61 RCLQLFVHLT FLLGVYTQLP KEMLSQAKIK ALPIYTPKKN LVQIYNILLP LLLTPSLLQG 120
  121 PLNLHYADLL LLHLYLLNCH EQGSLIEEPR PLFLDPSWKE KVTSIMSPQM VDPSKMISSC 180
  181 LSLLQPNVDN WLQDKLKHYL TTCLCRETGV QGFLKVYMQA QPNSIERARQ AAHLISSVPK 240
  241 DISPQKYFSC ILPQVWSLFS TQPRLASQLI IAVTNTHCDI VTSFLLKKLQ ILEAPKVIDL 300
  301 SPFENALDVL QVLVYIQNDD IIRICESCVP SLLHLQENTT LRSKVQDILL RIISVCGTKS 360
  361 LLRNLTNAKH LRIFCERLTK SQLAMFLPNL LEIWVQQPPD KRLELLELVQ YALSNVDSDE 420
  421 IPSNVMLSVC TNLINEVASQ NKYSSTEISQ ITTNREVEEE NEEILLVLLN IISSVIGRNA 480
  481 ELDLENPISS LLPALEQLSN YSNREISDLA KDVYKTLIQS KDDYSLALSY TQSDLVPVRG 540
  541 QGVYMLRKLI EKKDDRINPV RVLHVLINLL RDENSYVHLN VISAVVSLCD KYDDSLIRLL 600
  601 KEYTNTNKFT VDETLLIGQA IYQTMERQGE LVAKFYGQIE QTCLSMLNNE NTDIKISSLN 660
  661 IARLLCQMTS SDAFIESAKN ILILEMGSDK QFLRRAAVQL LDSCKHLPDS VITTLSYVGS 720
  721 HDKDDFIKES CLNILANQAD AAKYYLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] deduced N/A No confident structure predictions are available.
    2 View Details [140..330] MSA 1.265982 View MSA. No confident structure predictions are available.
    3 View Details [331..747] PSI-BLAST 61.0 No description for 2iaeA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle