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Protein Overview: SPAC11H11.03c

General Information:
Name(s) found: SPAC11H11.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SMR and DUF1771 domain protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA repair [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYEKFRAL ASKEAEKRGY LFQEAQHAYS AGNKAKAHEL SQEGKLCGER MENYNRQAAS  60
   61 AIYLYKNSQC NPDEIDLHGL YIDEAVQAVQ QRIENCIRRG DNHLHIIVGR GNHSANHVEK 120
  121 LRPAIVRMLE QQSIKYNSEV NEGRIYVYLP SATSPIQPNF NCIQEPQEAY SRPQHSTLTD 180
  181 QVEPEKIVEE IATNCFPRLK TCCAIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] Pfam 27.346787 No description for PF08590.1 was found. Confident ab initio structure predictions are available.
    2 View Details [69..206] PSI-BLAST 16.0 No description for 2d9iA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.46180911639784 bayes_pls_golite062009
  • catalytic activity
    		•  0.368034275052766 bayes_pls_golite062009
  • protein binding
    		•  0.224535421875415 bayes_pls_golite062009
  • ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
    		•  0.122352120181415 bayes_pls_golite062009
  • polynucleotide kinase activity
    		•  0.122352120181415 bayes_pls_golite062009
  • polydeoxyribonucleotide kinase activity
    		•  0.122352120181415 bayes_pls_golite062009
  • ATP-dependent polynucleotide kinase activity
    		•  0.122352120181415 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle