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Protein Overview: SPCC63.03

General Information:
Name(s) found: SPCC63.03 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • DNAJ domain protein, DNAJC11 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 642 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: Hsp70 protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEADSWELY LALGLPKDAT SDQIKESYYR LSRLFHPDRH TADQKAAAEE KFQIIQHAYE  60
   61 VLSDPSKKEI YDNFGEQGLK TDWNVGFPGK SAEELKNKIR EQIQERDIHE IDSLVQSRSE 120
  121 TTIVVNMTPL FARNIRVQNA LGLGAGTRML TPYERFSLIQ WVSFQIKSSF SIPTSFSNDL 180
  181 KKPSFNSFSS GSFDDEFSAP SDEDEGNHKT SSRLSIVTEA SMRQNSKLQP SIFAVYHSQP 240
  241 SPNLSSEIGF SLLRPGLITV KSVYAINNQT FIVPLIQISG LKRPPQATVV IGRQITRFGT 300
  301 LTARWKTGVW SLGSWGIASP RGANSSFSLT WQQMKAIPNS LVPQLSWNAE VTAGLMYSGI 360
  361 AYNYNLKNAT EDSPYQIKLG TSMSTVGGLQ VSGDTSRKVG RYSTFGVNIS VGVPTGSITF 420
  421 SLNWSRLGQK ISLPIMWCSV FDRSAVFWGL VFPITSILGV EQFFLRPRRL SNQKRLRLLR 480
  481 LQKLKDSQER KKVSAIRAVK LMKEIVEKKQ KLEMEKGGLV IEYAEYRVVN CGANEPDLKQ 540
  541 DVTISIAALV ENSRLAIPSS VSKSSIIGIY PLFSDNEKEL EIVYTFHQQR HRVVLRDKQG 600
  601 VFLPSRGMLS YNHIKHVLTS TRTQNFVLND TSLLNNHCLH FR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 24.09691 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    2 View Details [116..336] PSI-BLAST 34.69897 The crystal structure of Hsp40 Ydj1
    3 View Details [337..465] deduced N/A No confident structure predictions are available.
    4 View Details [466..642] MSA 2.033971 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.823553393353769 bayes_pls_golite062009
  • protein binding
    		•  0.40147996507406 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.922056839584135 bayes_pls_golite062009
  • protein binding
    		•  0.37137044680558 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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