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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC63.03
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEADSWELY LALGLPKDAT SDQIKESYYR LSRLFHPDRH TADQKAAAEE KFQIIQHAYE  60
   61 VLSDPSKKEI YDNFGEQGLK TDWNVGFPGK SAEELKNKIR EQIQERDIHE IDSLVQSRSE 120
  121 TTIVVNMTPL FARNIRVQNA LGLGAGTRML TPYERFSLIQ WVSFQIKSSF SIPTSFSNDL 180
  181 KKPSFNSFSS GSFDDEFSAP SDEDEGNHKT SSRLSIVTEA SMRQNSKLQP SIFAVYHSQP 240
  241 SPNLSSEIGF SLLRPGLITV KSVYAINNQT FIVPLIQISG LKRPPQATVV IGRQITRFGT 300
  301 LTARWKTGVW SLGSWGIASP RGANSSFSLT WQQMKAIPNS LVPQLSWNAE VTAGLMYSGI 360
  361 AYNYNLKNAT EDSPYQIKLG TSMSTVGGLQ VSGDTSRKVG RYSTFGVNIS VGVPTGSITF 420
  421 SLNWSRLGQK ISLPIMWCSV FDRSAVFWGL VFPITSILGV EQFFLRPRRL SNQKRLRLLR 480
  481 LQKLKDSQER KKVSAIRAVK LMKEIVEKKQ KLEMEKGGLV IEYAEYRVVN CGANEPDLKQ 540
  541 DVTISIAALV ENSRLAIPSS VSKSSIIGIY PLFSDNEKEL EIVYTFHQQR HRVVLRDKQG 600
  601 VFLPSRGMLS YNHIKHVLTS TRTQNFVLND TSLLNNHCLH FR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle