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Protein Overview: SPAC25B8.16

General Information:
Name(s) found: SPAC25B8.16 [Sanger Pombe]
Description(s) found:
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  • gi|74625929|sp|Q9UTA4.1|POPI_SCHPO RecName: Full=Ribonucleases P/MRP protein subunit pop1 [NCBI NR]
  • gi|6469303|emb|CAB61782.1| RNase P and RNase MRP subunit (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115388|ref|NP_594476.1| RNase P and RNase MRP subunit (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • pir||T50203 yeast RNAses P/MRP protein Pop1 homolog [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • RNase P and RNase MRP subunit [Sanger Pombe]
  • Ribonucleases P/MRP protein subunit pop1 OS=Schizosaccharomyces pombe GN=pop1 PE=2 SV=1 [Swiss-Prot]
  • SIMILAR TO S. CEREVISIAE RNASES P/MRP PROTEIN ; POSSIBLY INVOLVED IN TRNA MATURATION; 5.8S RRNA PROCESSING; SUBCELLULAR LOCALIZATION OF GFP FUSION-NUCLEUS: Q9UTA4; [pompepVF.fasta]
  • SIMILAR TO S. CEREVISIAE RNASES P/MRP PROTEIN ; PUTATIVE INVOLVEMENT IN TRNA MATURATION; 5.8S RRNA PROCESSING; SUBCELLULAR LOCALIZATION OF GFP FUSION-NUCLEUS: Q9UTA4; [pompepV13]
  • Similar to S. cerevisiae RNAses P/MRP protein Pop1, putative involvement in tRNA maturation 5.8S rRNA processing [pompep4896]
  • |||similar to S. cerevisiae YNL221C [pompepnew.fasta]
  • SPAC25B8.16 protein [4896.FASTAC]
  • |||ribonuclease subunit (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • similar to S. cerevisiae RNAses P/MRP protein Pop1; putative involvement in tRNA maturation 5.8S rRNA processing [Schizosaccharomyces pombe]gi|6469303|emb|CAB61782.1| SPAC25B8.16 [Schizosaccharomyces pombe]gi|11289930|pir||T50203 yeast RNAses P/MRP prot [nrdb_11152004_Chlamydomonas]
  • |||ribonuclease subunit |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UTA4) Similar to S. cerevisiae RNAses P/MRP protein Pop1, putative involvement in tRNA maturation 5.8S rRNA processing [pompep4896_normal_reversed]
  • |||RNase P and RNase MRP subunit |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC25B8.16 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC25B8.16 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Ribonucleases P/MRP protein subunit pop1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pop1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 698 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ribonuclease MRP complex [RCALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    nucleolar ribonuclease P complex [ISSLink to PubMed article]
    Biological Process: tRNA processing [ISSLink to PubMed article]
    rRNA processing [ISSLink to PubMed article]
    tRNA 5'-leader removal [IEA]
    Molecular Function: ribonuclease P activity [ISSLink to PubMed article]
    ribonuclease MRP activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSTGGTQP KGLNVKRSKL ADARFIEVES PALSNGAVDL KKFIESRSFE ITALQDAMKR  60
   61 SKESSAQRAF QALPRCLRRR AASHNIKRIP KGLRDRALYE MQLSSSSTLP IAPSRQRLKR 120
  121 FIKRLRRKLA KSGETKAIDS TGSLVTDNST DDSRIPSLAA VKLIRGKFAG RQLRKVWLPT 180
  181 HLWVCKRAHM INAWGYAIPE KPTEKSYRPT HRAAFRKDAI AFDMSYEPLF CISGPYEALK 240
  241 EKFGNSFANG LPPVFLNSSR SFTSYLVKSD IHELICPCFL QWNNPTEDDK KQIPVKNPTE 300
  301 CVQLVIRLHP SAFLQAWNYL SGIAVLDDRI AMHDWRLDLA SFDIHGPDSN IMLHKVFDDV 360
  361 ELDEAGKVWQ SISNYSSACL PMGASISVKA LVNTRCDKNL SEKGEKSLLD SAENSLPASA 420
  421 NQYSTHFRYW ERQEIPSFAV FENKNRHTHE KKSSEKEVIP VYITYRKEWN GLTVILPWDY 480
  481 AKFVWRKMMY QKGIRFGGLE NLHQIAFEKR MPFFPIDYPD TISGQLCEEE RKKRNEDSWK 540
  541 RRPPAKRVNY QKFGDNFSEI GNPFCCDWVY LNEMVKASRD EDKTLQLVRV QVQLVQRGSL 600
  601 QDRARIYCLS DDELSKWKTI IYKENLTAEN LLYPKCPNET AIIGFVTTGN FNLNAGKPSG 660
  661 IANVLAKTIK NEKSGYCIIR NVGCSVPRLA QWKFNQSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] Pfam 4.130768 No description for PF06978.2 was found. No confident structure predictions are available.
    2 View Details [186..698] FFAS03 1.55 Crystal Structure of Human T-protein of Glycine Cleavage System


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle