YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC23G3.06

General Information:
Name(s) found: SPAC23G3.06 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • U3 snoRNP protein Nop58 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 508 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    small nucleolar ribonucleoprotein complex [ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISSLink to PubMed article]
    rRNA processing [ISSLink to PubMed article]
    Molecular Function: snoRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILTETAAG YAIFKAKDKL LKKRDALIED LKSPEGASNL LKLQSFAKFE STVDALDNVS  60
   61 ALVEGKVSSK LSSLLEGLSD SKSSTLVVAD PKLGNAINKL PGLEFEIISD SSVQDLYRGI 120
  121 REHLSSLISG LAPSDLNAMS LGLSHSLSRH KLKFSPDKVD TMIVQAIALL DDLDKELNTY 180
  181 AMRVREWYGW HFPEMGKIIQ DNLAYARVIK AMGMRTKCSE TDFSDILPEE IEATLKSAAE 240
  241 ISMGTEITEE DLDNIVMLAD QVLELASYRA QLSEYLRNRM QAIAPNLTAL VGELVGARLI 300
  301 AHAGSLMNLA KQPASTIQIL GAEKALFRAL KTKHSTPKYG LIYHASLVGQ ANSKNKGKIA 360
  361 RVLATKAALS LRVDALSDKD TTNGNIGLEN RIRVENRLRS LEGGKLLPLP TAPVQQSKVQ 420
  421 INGTSAYSTA TDAVTKDAEE SQEDVEMDIV IEKKKKKSSK LKEADGESSK KEKKEKKDKK 480
  481 HKKSKRKSEE SEDGESPKKK KKSKKSKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 97.522879 No description for 2nnwA was found.
    2 View Details [422..508] PSI-BLAST 9.69897 Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle