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View Structure Prediction Details

Protein: SPAC23G3.06
Organism: Schizosaccharomyces pombe
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23G3.06.

Description E-value Query
Range
Subject
Range
gi|114680995 - gi|114680995|ref|XP_514472.2| PREDICTED: nucleolar protein 5A [Pan troglodytes]
553.0 [0..1] [508..189]
gi|77748280 - gi|77748280|gb|AAI06292.1| LOC398558 protein [Xenopus laevis]
550.0 [0..1] [478..1]
gi|13623892 - gi|13623892|dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
549.0 [0..1] [493..1]
gi|125543859 - gi|125543859|gb|EAY89998.1| hypothetical protein OsI_11565 [Oryza sativa Indica Group]
gi|108708132, gi... - gi|215704653|dbj|BAG94281.1| unnamed protein product [Oryza sativa Japonica Group], gi|108708132|gb|...
548.0 [0..1] [497..1]
gi|125774945, gi... - gi|54638465|gb|EAL27867.1| GA12569-PA [Drosophila pseudoobscura], gi|125774945|ref|XP_001358724.1| G...
547.0 [0..1] [426..4]
gi|3288883 - gi|3288883|dbj|BAA31260.1| SAR DNA binding protein [Oryza sativa]
544.0 [0..1] [497..1]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILTETAAG YAIFKAKDKL LKKRDALIED LKSPEGASNL LKLQSFAKFE STVDALDNVS  60
   61 ALVEGKVSSK LSSLLEGLSD SKSSTLVVAD PKLGNAINKL PGLEFEIISD SSVQDLYRGI 120
  121 REHLSSLISG LAPSDLNAMS LGLSHSLSRH KLKFSPDKVD TMIVQAIALL DDLDKELNTY 180
  181 AMRVREWYGW HFPEMGKIIQ DNLAYARVIK AMGMRTKCSE TDFSDILPEE IEATLKSAAE 240
  241 ISMGTEITEE DLDNIVMLAD QVLELASYRA QLSEYLRNRM QAIAPNLTAL VGELVGARLI 300
  301 AHAGSLMNLA KQPASTIQIL GAEKALFRAL KTKHSTPKYG LIYHASLVGQ ANSKNKGKIA 360
  361 RVLATKAALS LRVDALSDKD TTNGNIGLEN RIRVENRLRS LEGGKLLPLP TAPVQQSKVQ 420
  421 I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.522879
Match: 2nnwA
Description: No description for 2nnwA was found.

Predicted Domain #2
Region A:
Residues: [422-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGTSAYSTAT DAVTKDAEES QEDVEMDIVI EKKKKKSSKL KEADGESSKK EKKEKKDKKH  60
   61 KKSKRKSEES EDGESPKKKK KSKKSKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1w9rA
Description: Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle