YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: arg5

General Information:
Name(s) found: arg5 / SPBC56F2.09c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • arginine specific carbamoyl-phosphate synthase Arg5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    carbamoyl-phosphate synthase complex [ISS]
    Biological Process: arginine biosynthetic process [ISSLink to PubMed article]
    glutamine metabolic process [IEA]
    Molecular Function: ATP binding [IEA]
    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFLKPFPL RFGKRFYSKV PPVTNHERIL PKQPSFPTAP AQNEIATLTI RNGPIFHGTS  60
   61 FGANRNVSGE AVFTTSPVGY VESLTDPSYK QQILIFTQPL IGNYGVPDCK KRDENGLLRH 120
  121 FESPHIQCAG VVVNDYATKY SHWTAVESLG EWCAREGVAA ITGVDTRAIV TFLREQGSSL 180
  181 AKISIGEEYD ANDDEAFINP EEVNLVSQVS TREPFFVSGG DGMLNIAVID CGVKENILRS 240
  241 LVSRGASVTV FPFDYPIQNV ASNYDGIFLT NGPGDPTHLT KTVNNLRELM NTYNGPIMGI 300
  301 CMGHQLLALS TGAKTIKLKY GNRGHNIPAL DIASGNCHIT SQNHGYAVDA STLPAEWKAT 360
  361 WTNLNDQSNE GIAHVSRPIS SVQFHPEARG GPMDTFYLFD NYIKEAIKYQ KSRTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..51] MSA 1.155994 View MSA. No confident structure predictions are available.
    2 View Details [52..415] PSI-BLAST 109.0 Carbamoyl phosphate synthetase, small subunit N-terminal domain; Carbamoyl phosphate synthetase, small subunit C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  9.74519370915839 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  9.70414577567935 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  9.14496558670743 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  7.05319676113266 bayes_pls_golite062009
  • ligase activity
    		•  1.70348758031146 bayes_pls_golite062009
  • phosphoribosylformylglycinamidine synthase activity
    		•  1.51568729563523 bayes_pls_golite062009
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.270391651600004 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  0.243205818526006 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.12569720972861 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle