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Protein Overview: SPAC6F6.03c

General Information:
Name(s) found: SPAC6F6.03c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ribosome export GTPase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    spindle [IDALink to PubMed article]
    nucleolus [ISSLink to PubMed article]
    Biological Process: ribosomal large subunit export from nucleus [ISSLink to PubMed article]
    Molecular Function: GTP binding [ISSLink to PubMed article]
    GTPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTYKKEKSR IGREGANEKK PGNLRVKGEN FYRNAKDVAR VNMYRGGKAK YNAAGELVRA  60
   61 AEFQSSEVPK ARIQPDRRWF NNTRVIAQPT LTQFREAMGQ KLNDPYQVLL RRNKLPMSLL 120
  121 QENTEIPKVR VLESEPFENT FGPKSQRKRP KISFDSVAEL AKESDEKQNA YEEKIEERIL 180
  181 ANPDESDDVM LAARDAIFSK GQSKRIWNEL YKVIDSSDVL IQVLDARDPV GTRCGTVERY 240
  241 LRNEASHKHM ILVLNKVDLV PTSVAAAWVK ILAKEYPTIA FHASINNSFG KGSLIQILRQ 300
  301 FASLHSDKKQ ISVGLIGFPN AGKSSIINTL RKKKVCNVAP IPGETKVWQY VALMKRIFLI 360
  361 DCPGIVPPSS NDSDAELLLK GVVRVENVSN PEAYIPTVLS RCKVKHLERT YEISGWNDST 420
  421 EFLAKLAKKG GRLLKGGEPD EASVAKMVLN DFMRGKIPWF IGPKGLSSSN DEINSSQKVA 480
  481 TQQTEGSDQD GEEAEEEWHG ISDDGKADES ESTKPVAEGS ASESTDESAV DDNKNRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 24.154902 Structure of the GTP-binding protein TrmE from Thermotoga maritima
    2 View Details [143..537] PSI-BLAST 50.0 No description for 2hjgA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle