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Protein Overview: SPBC1198.06c

General Information:
Name(s) found: SPBC1198.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mannan endo-1,6-alpha-mannosidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: anchored to external side of plasma membrane [ISSLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: fungal-type cell wall biogenesis [ISSLink to PubMed article]
    cellular oligosaccharide catabolic process [ICLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: mannan endo-1,6-alpha-mannosidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIYSVGLFY FFLVFIGAQA MDLDITDYQS IDNTVNIMMK DLMNYWNASS QAFVASYWWV  60
   61 TGATMGALLY NYELFNNDTY VDLISSSLLY NAGSGFDYQP SFEYFNLGND DQGMWAAAAM 120
  121 DAAEANFSPP NSTEHSWLEL TQAAFNRMSG RWDSSTCGGG LRWQAFAWLN GYSYKASVSN 180
  181 ALLFQLSSRL ARFTNESVYS DWANKIWDWT TDVGFVNTTT YAVYDGADTS TNCTTLDPSQ 240
  241 WSYNIGIFMV GAAYMYNYTG ETVWRERLDG LISHATSYFF TDDIAWDPQC EYFDDCNSDQ 300
  301 TAFKGIFMQS FGNTIRLAPY TYDTLYPLIQ TSAAAAAKQC CGGYSGTSCG IYWFWNNGTW 360
  361 DDNYGVQEQF SALQAVQMLM IEYAPEIATL ASSTDNRSNS TYASNVVIND TNTTTTIVVK 420
  421 EKDRGGAGFL TFLSAIFILG ASIWALVEDE EGKIPSRGKK GIAISS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..466] FFAS03 3.83 Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • trehalase activity
    		•  4.23942428290504 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.78681366425382 bayes_pls_golite062009
  • alpha,alpha-trehalase activity
    		•  3.55712700159445 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.06084463737498 bayes_pls_golite062009
  • hydrolase activity
    		•  2.4324152075641 bayes_pls_golite062009
  • glucosidase activity
    		•  1.29725707798041 bayes_pls_golite062009
  • binding
    		•  1.09492132758288 bayes_pls_golite062009
  • catalytic activity
    		•  1.0882760267763 bayes_pls_golite062009
  • glucan 1,4-alpha-glucosidase activity
    		•  0.459801253504163 bayes_pls_golite062009
  • protein binding
    		•  0.208998323911823 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.0402220178011703 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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