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Protein Overview: SPBC19C7.06

General Information:
Name(s) found: SPBC19C7.06 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • proline-tRNA ligase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 716 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: prolyl-tRNA aminoacylation [ICLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    proline-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDSLVSCL EQLITDDLKL VEHQEVSNGA TWASALQSTK DVPSHALTKT IVLKPKTAKS  60
   61 QTVVPIILAA LETTSTPSGI AAKAVGSKEA RMAAADLVEE VFGIPPTDVG IFSVNKENAS 120
  121 KVHVVLDAAL IQHNGLLAFH PSSSAKTVFV SPAAVQTYLK SVGVNPIIVD FSAPGSATAP 180
  181 SKPAAQKKKA EPSKNDAAIE NAALIGITVR KDADFPNWYQ QVLTKSDMIE YYDISGCYIL 240
  241 KPWSYSIWEA IQGWFDKEIK KLGVRNGYFP LFVSSKVLEK EKDHVEGFAP EVAWVTRAGT 300
  301 SELDEPIAIR PTSETVMYPY YAKWIRSHRD LPLKLNQWNS VVRWEFKNPQ PFLRTREFLW 360
  361 QEGHTAHMTL EGATEEVHQI LDLYARIYTD LLAVPVIKGV KSENEKFAGG MFTTTVEGYI 420
  421 PTTGRGIQGA TSHCLGQNFS KMFNIVVEDP NAEIGPTGER PKLFVWQNSW GLSTRTIGVA 480
  481 VMVHGDDKGL KLPPAIALVQ SVVVPCGITN KTTDQERNEI EGFCSKLADR LNAADIRTEA 540
  541 DLRAYTPGYK FSHWEMKGVP LRLEYGPNDA KKNQVTAVRR DTFEKIPVPL NNLEKGVSDL 600
  601 LAKIQTNMYE TAKAERDAHV VKVKEWADFV PALNKKNIVM IPWCNTTECE KEIKKNSARQ 660
  661 VNGDEPEDEK APSMGAKSLC IPLEQPSGED AIIEGTTKCA GCGNLAKVWG LFGRSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] PSI-BLAST 18.154902 Crystal structure of putative DNA-binding protein from Caulobacter crescentus at 1.62 A resolution
    2 View Details [75..209] PSI-BLAST 71.39794 No description for 2dq3A was found.
    3 View Details [210..421] PSI-BLAST 9.30103 No description for 2q7eA was found.
    4 View Details [422..559] FFAS03 5.25 No description for 2j3lA was found.
    5 View Details [560..644] PSI-BLAST 73.0 Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS)
    6 View Details [645..716] PSI-BLAST 93.30103 Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle