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Protein Overview: SPBC1709.16c

General Information:
Name(s) found: SPBC1709.16c [Sanger Pombe]
Description(s) found:
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  • pir||T39644 conserved hypothetical protein SPBC1709.16c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582549|sp|O74741.1|DIOXL_SCHPO RecName: Full=4,5-DOPA dioxygenase extradiol-like protein [NCBI NR]
  • gi|3738154|emb|CAA21255.1| aromatic ring-opening dioxygenase (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112241|ref|NP_595449.1| conserved protein (fungal bacterial plant) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • aromatic ring-opening dioxygenase [Sanger Pombe]
  • 4,5-DOPA dioxygenase extradiol-like protein OS=Schizosaccharomyces pombe GN=SPBC1709.16c PE=2 SV=1 [Swiss-Prot]
  • CONSERVED PROTEIN; CONTAINS PFAM-B_11186; NO APPARENT S. CEREVISIAE ORTHOLOG: O74741; [pompepVF.fasta]
  • CONSERVED HYPOTHETICAL PROTEIN; CONTAINS PFAM-B_11186: O74741; [pompepV13]
  • Conserved hypothetical protein [pompep4896]
  • |||conserved protein [pompepnew.fasta]
  • SPBC1709.16c protein (EC 1.13.11.-) [4896.FASTAC]
  • |||conserved protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • conserved hypothetical protein [Schizosaccharomyces pombe]gi|3738154|emb|CAA21255.1| SPBC1709.16c [Schizosaccharomyces pombe]gi|7490318|pir||T39644 conserved hypothetical protein SPBC1709.16c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||conserved protein |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O74741) Conserved hypothetical protein [pompep4896_normal_reversed]
  • |||aromatic ring-opening dioxygenase |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC1709.16c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC1709.16c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVPQLERL IPALYLAHGS PFLMLPQSSD DEVFSNDSKL GGLHYQFLEQ LGPFLLEKFR  60
   61 PKGIIVFSAH YESRGSVEVY SRDDENPLFY DYYGFPDYLY QIKFHSKGSK RIADQIISAL 120
  121 KEYQIPAKTV SGDRGLDHGV FVPFKIMFPD GLNIPLIEVS MHTLDPMQLY KVGQALQSLR 180
  181 KEYLIVSGGL NIHTFEDLSA FNEDTAADGY KEFQLDILKA IETDKQNDRL NKLLGLQLHP 240
  241 YFRKAHPREE HFVPLYVAAG LGSSGKSKVV CDLYGAVSAF FGIDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..285] PSI-BLAST 62.39794 No description for 2pw6A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  1.48772648834229 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.778026315854975 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  0.676429180336887 bayes_pls_golite062009
  • catalytic activity
    		•  0.639120026974844 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle