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Protein Overview: SPAC458.02c

General Information:
Name(s) found: SPAC458.02c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • mRNP complex [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 468 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [ISSLink to PubMed article]
    nuclear membrane-endoplasmic reticulum network [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: mRNA metabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHKPVRPN EALHKEALEE LDAKINEAKK RFNEHKEKLG AIRGGGSLQE KNAELRAELD  60
   61 NIRNAQAAIR SSKQTLINKV KAQDELLKKK VKELTAMKKT VPFKSEVELD KHVKQLQAAV 120
  121 DSGTLKIVDE KKYLREISQC NRTRKSFVEL NALQTSIDTI RNELNELRDQ LNDSESKKLS 180
  181 DKFVEIRSEL DEVRKQQDGY YKDQRKLIAE RDDEKTALDD LYNQRRALQR EYDTQLRAFR 240
  241 TYEREQRAKR QEQFRLEREN REKEKRRIAA QRKLEEASIP AFTEEILACE NLLKVFHVPV 300
  301 ESSTTNAVST GNTSSKILKP RTLTPRTVDP IPEGTIIKKE SSDDAMFSGL KKSKPKKSNK 360
  361 SNNNQADSDR LNLSFGTIKE FDFVGVPAPF TKSQVDSAVE QLKSRIAHFK EQQDSVTKQR 420
  421 IEKAKQEIEK LEAKYNSKEE KTLTEADMVI SSEETVTVTN DLEVEATA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 21.154902 Heavy meromyosin subfragment
    2 View Details [311..468] PSI-BLAST 10.154902 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle