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Protein Overview: SPBC14F5.06

General Information:
Name(s) found: SPBC14F5.06 [Sanger Pombe]
Description(s) found:
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  • pir||T39452 probable RNASE L inhibitor - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74676038|sp|O60102.1|YOX6_SCHPO RecName: Full=Uncharacterized ABC transporter ATP-binding protein C14F5.06 [NCBI NR]
  • gi|3184109|emb|CAA19324.1| iron-sulfur protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113524|ref|NP_596732.1| iron-sulfur protein [Schizosaccharomyces pombe] [NCBI NR]
  • iron-sulfur protein [Sanger Pombe]
  • Uncharacterized ABC transporter ATP-binding protein C14F5.06 OS=Schizosaccharomyces pombe GN=SPBC14F5.06 PE=2 SV=1 [Swiss-Prot]
  • IRON SULPHER PROTEIN; PUTATIVE RNASE L INHIBITOR; SIMILAR TO S. CEREVISIAE RLI1: O60102; [pompepVF.fasta]
  • PUTATIVE RNASE L INHIBITOR: O60102; [pompepV13]
  • Putative RNase L inhibitor [pompep4896]
  • |||iron sulpher protein [pompepnew.fasta]
  • SPBC14F5.06 protein [4896.FASTAC]
  • |||iron-sulfur protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative RNASE L inhibitor [Schizosaccharomyces pombe]gi|3184109|emb|CAA19324.1| SPBC14F5.06 [Schizosaccharomyces pombe]gi|7492939|pir||T39452 probable RNASE L inhibitor - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O60102) Putative RNase L inhibitor [pompep4896_normal_reversed]
  • hypothetical protein SPBC14F5.06 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC14F5.06 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |rli1||iron-sulfur ATPase involved in ribosome biogenesis Rli1 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 593 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    cytosolic ribosome [ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ribosomal large subunit biogenesis [ISSLink to PubMed article]
    translational initiation [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [ICLink to PubMed article]
    iron-sulfur cluster binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESLTRIAI VSEDKCRPKK CRQECRRSCP VVRTGKLCIE VNPTDRIAFI SETLCIGCGI  60
   61 CVKKCPFGAI NIINLPTNLE SEVTHRYSAN SFKLHRLPTP RPGQVLGLVG TNGIGKSTAL 120
  121 KILSGKMKPN LGRYDNPPDW AEVVKYFRGS ELQNFFTKVV EDNIKALIKP QYVDHIPRAI 180
  181 KTGDKTVSGL IKARANNNNF EEVMDHTDLQ NLLNREVGHL SGGELQRFAI AAVATQKADV 240
  241 YMFDEPSSYL DIKQRLKAGR VIRSLLATTN YVIVVEHDLS VLDYLSDFVC VLYGVPSMYG 300
  301 VVTLPYSVRE GINIFLDGHI PTENLRFRSE ALTFRLADAS DEITADRTAE YNYPDHVIEQ 360
  361 GDFKLTIKSG GFSDAEIIVL LGENGTGKTT FCKWMAKNSD LKISMKPQTI APKFQGTVRM 420
  421 LFLKKIRAAF LNGKFQSEVC KPLSIDNIID QEVLNLSGGE LQRVAICLAL GMPADVYLID 480
  481 EPSAYLDSEQ RIIASKVIRR FIVNSRKTAF IVEHDFIMAT YLADRVILFE GQPSRDARCN 540
  541 PPQSLLTGMN TFLKNLDVTF RRDPNTLRPR INKFDSQMDQ EQKNAGNYFF LEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] FFAS03 2.34 No description for 2ivfB was found.
    2 View Details [75..593] PSI-BLAST 79.0 RNase-L Inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle