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Protein Overview: SPBC1703.03c

General Information:
Name(s) found: SPBC1703.03c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • armadillo repeat protein, unknown biological role [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 664 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRANGKRRN HRKNRMNPIQ KKGFLEQEIP LNNSEAALPL LSRLDNPEIK ERSWACSAIS  60
   61 NIIASCTEGR LYLLKNGLVS KLIDRISDDS VEVVVEATGA LRNLAIEEGY SICMDMYRKN 120
  121 VLAPLQIWQT KIVQTLDEAT EGKNVLETYE DRSTFSCLCA IAENISSLLV NLGETTSQVI 180
  181 KVLNQKNTLV FLSRLLIPEA KIPQSVQEMA LQAFFTLTDD NDDGIITWIQ NSSDFALKTI 240
  241 NQIYLYFSYP SCLVRVYSIG IIYNIYQSGF VNKKMESVVK GISLFDSFIP EALPILSDLL 300
  301 PSEENYRNLV RQVYDKDTYF KTKKDDLTLS SELLVIPATL ELISSMTSLL QSLADGTDEL 360
  361 EEQEDSLMED EDLSYMDDMS NVVNEDENLI IDEIPSNTPQ KGNFKLVEYM LDHVLPKVIT 420
  421 YCVVAFEFSS EEIPSNLSNY FQEVGDRTIE CLNNISWSCN SVFVESSEAF TRWKLSAGKI 480
  481 LQWIFQTIFL RLGLGVWPFS SEGFTTACSL LWSVSKPFPA EIQVLSVDDI STLILFSSTH 540
  541 GSLEAQSRLL GAFGSLGRCG NIQINQLLGQ TLMSCVIASD PNPLLAVEAL NAIFDVYGDK 600
  601 SYPYDAPVFK GSGYLSQLSE ALPRLKNMVK KIDRRREKHL RFRAEEALEN LESFIDYKHA 660
  661 EYAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 80.221849 Importin alpha
    2 View Details [395..524] deduced N/A No confident structure predictions are available.
    3 View Details [525..664] MSA 2.043989 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.68829442357484 bayes_pls_golite062009
  • protein binding
    		•  0.5289921716776 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle