YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC1683.11c

General Information:
Name(s) found: SPBC1683.11c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • isocitrate lyase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 518 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: propionate metabolic process [ISSLink to PubMed article]
    threonine catabolic process [ISSLink to PubMed article]
    Molecular Function: methylisocitrate lyase activity [ISSLink to PubMed article]
    isocitrate lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTDMDLEQL EYEKEVEEIE KWWATPKQSQ IKRPYTASTV AVLSEVTKAY YPSSQQALKL  60
   61 YDLLREHRNK GTATLTYGVV DPVLASQASK AGLETIFVSG CLCGLSSVDE PGMDHADYPW 120
  121 DTVPKAVDRI FRSQNWHARR QKQFHLMKPA EERKQLPKYD YLLPIIADGD MGFGSVTSTM 180
  181 KMTKRFVESG VAMIHLDDLA IGLKRFTVGQ GRTVVPTSEY LRRLTAVRLQ FDIMKAETML 240
  241 LCRCDTDHAE FITSVVDPRD HAYVLGATTK IESLIKALKD AESTGVSMKK ARENWIERAK 300
  301 LMTFDEAVKS TATPKEYENY ISAISKKPFH SISERQELAE KYLSNEVFFD WELPRSSDGQ 360
  361 YFFKPTVQTV IERAIAAAPL GEMTWARMDY PKWQDIKAFH EGVRAVYPDR MFAFGFTGNY 420
  421 DFKAAGFSEE QLRNLTSDMA KLGVCWQVQP YFTCQVLNKA SVDYSNIWKK DGIFGYVKTV 480
  481 QEPALKEDVD GFENEWCGTY FADKLLSAAG SSDKTIPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..518] PSI-BLAST 1000.0 Isocitrate lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • isocitrate lyase activity
    		•  4.96824258511407 bayes_pls_golite062009
  • methylisocitrate lyase activity
    		•  4.21728284668468 bayes_pls_golite062009
  • catalytic activity
    		•  2.59838799615646 bayes_pls_golite062009
  • transferase activity
    		•  1.07154136609184 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.366715189574293 bayes_pls_golite062009
  • lyase activity
    		•  0.0456521871650777 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle