YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC211.08c

General Information:
Name(s) found: SPBC211.08c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • ribonuclease PH-like [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic exosome (RNase complex) [ISS]
    nuclear exosome (RNase complex) [ISS]
    nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleolus [IEA]
    Biological Process: rRNA processing [ISS]
    mRNA catabolic process [ISS]
    Molecular Function: 3'-5'-exoribonuclease activity [NASLink to PubMed article]
    RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRKRVYGP SVSVPPYFEE PEQPVFTRTR DVDRCRKIYL KLGWATKAVG SSYFESEKIK  60
   61 IACTVSGPRP SKTFAFRSSA KLNCEFRLSP FSTSVRQGHV QTVEEKSYSQ MIEAAISPSI 120
  121 LLHLYPKSSI DVYIQVIESD GALATLAAAI SCASSAIADA NIDCIDLVTG SSVLFNPNTD 180
  181 EYWIDPDYVD ERARAAKGSV VMGYMASLGH VTQVWERGTC SPSRLSFLTE KCIKNAKDTR 240
  241 LVINHALLLE KSKSEDP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 60.522879 Archaeal exosome core


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle