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Protein Overview: cid11

General Information:
Name(s) found: cid11 / SPBC1685.06 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • poly(A) polymerase Cid11 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: ATP binding [IEA]
    RNA binding [IEA]
    polynucleotide adenylyltransferase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLTFTCCP FEGQMQQKKR RFDANLVQLQ ESEHRNDQIN ETVDAELTNE CWKLYMRLKP  60
   61 SNEEVSRRQQ FVDKLRTILS TEIKDAKLDL FVFGSTENNL AIQQSDVDVC IITNGSKYLN 120
  121 STCQLAQLLY SYGMKQIVCV SRARVPIVKI WDPQFDIHCD LNINNDVAKI NTKMLRLFVS 180
  181 IDPRVRPLGL IIKYWAKQRA LCDAAGSGTI TSYTISCMLV NFLQTRNPPI LPAMLDLMSN 240
  241 DDNKMFVDDI VGFKEKATLN KTSLGRLLID FFYYYGFSFN YLDSVVSVRS GTVLNKQEKG 300
  301 WAMEVNNSLC VEEPFNTARN LANTADNPSV KGLQSEFQRA FRLMSENNAC ERLCKICEEY 360
  361 QFLDITNEAN YGNTNTPFNT AYESFGCNHT VLPEAAAYPK PYYPPQITLS DGGNMNFLYY 420
  421 IPDESNHQSY ENKANRDSDF QGQTSLTQGS APPWHYIPCQ SWLVWYPSED ASNPASGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..478] PSI-BLAST 73.0 Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring phosphorus-containing groups
    		•  0.700885882576134 bayes_pls_golite062009
  • transferase activity
    		•  0.506774368835282 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.364145331143168 bayes_pls_golite062009
  • binding
    		•  0.127331270075375 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle