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Protein Overview: tom20

General Information:
Name(s) found: tom20 / SPAC6F12.07 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • mitochondrial TOM complex subunit Tom20 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 152 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    integral to membrane [IEA]
    mitochondrial outer membrane translocase complex [ISSLink to PubMed article]
    Biological Process: mitochondrial outer membrane translocase complex assembly [ISS]
    protein import into mitochondrial matrix [ISSLink to PubMed article]
    Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity [ISSLink to PubMed article]
    signal recognition particle binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSVIIGSL LATAAVGYAI YFDYKRRNDP HFRKTLKRRY KKVHEAKKQE EKLATKKFDI  60
   61 TVEEALQVVA STPVPSSAEE KELFFMQQVA RGEQLFQQQP DNIKESAACF YSALKVYPQP 120
  121 VELFAIYERT VPEPIMNLLR AMQAKESIPS VE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] MSA 1.026985 View MSA. No confident structure predictions are available.
    2 View Details [76..152] PSI-BLAST 17.39794 Mitochondrial import receptor subunit Tom20

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • P-P-bond-hydrolysis-driven protein transmembrane transporter activity
    		•  3.40898729129243 bayes_pls_golite062009
  • macromolecule transmembrane transporter activity
    		•  3.40898729129243 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  2.85488085984023 bayes_pls_golite062009
  • protein transporter activity
    		•  2.05250883327513 bayes_pls_golite062009
  • transporter activity
    		•  1.79559401386194 bayes_pls_golite062009
  • binding
    		•  1.66795187393523 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.6303525042646 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.49267876312697 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.3436996680931 bayes_pls_golite062009
  • protein binding
    		•  1.10534436186662 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.0671316259706 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.06141451496527 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.01882616059722 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle