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Protein Overview: SPAPJ696.02

General Information:
Name(s) found: SPAPJ696.02 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • actin cortical patch component Lsb4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: actin cortical patch [ISSLink to PubMed article]
    Biological Process: actin filament organization [ISSLink to PubMed article]
    endocytosis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHNPLPSS LKSECKKAGK ILTSFVDPRQ TLGAQEVIPP SVLTNAKGLV IMTVLKAGFL  60
   61 FSGRIGSGLI VARLDDGTWS APSAVMTGGM GVGAQIGSEL TDFVIILNSK AAVQTFARLG 120
  121 SITLGGNLSI AAGPLGRNAE AGGGASVGGM APMFSYSKTK GLFAGVSLEG SVLVERRDAN 180
  181 RSLYRGDITA KRLLSGQVAQ PAAADPLYRV LNSKIFNLNR GDEGDIYNDV PIYADDEPED 240
  241 IWGPSSKSTK RRDSADRSSS YSRRGDSYRS NRSRAHDDDD EDDYSFSRSK SLSRKTAGGS 300
  301 LRSSKMDNRR SKYADTPSPR RSRSYSDEDE ESVYSSDVST ESSSQFSSRS SEYSKPSRPT 360
  361 APKPKFKQDS LGPNQARAMY SFAGEQPGDL SFQKGDIIDI VERSGSHDDW WTGRIGYREG 420
  421 IFPANYVKLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] MSA 1.125987 View MSA. No confident structure predictions are available.
    2 View Details [81..218] Pfam 87.221849 No description for PF04366.3 was found. Confident ab initio structure predictions are available.
    3 View Details [219..350] deduced N/A No confident structure predictions are available.
    4 View Details [351..430] PSI-BLAST 19.39794 No description for 2a08A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle