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Protein Overview: SPCC569.05c

General Information:
Name(s) found: SPCC569.05c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • spermidine family transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: spermine transport [ICLink to PubMed article]
    transmembrane transport [IEA]
    spermidine transport [ICLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: spermine transmembrane transporter activity [ISSLink to PubMed article]
    spermidine transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNPNAGIQ PLTNSISQSA SAHPELYHTT SHESVSTYQL QSQLSHSATS NLSTAANFHT  60
   61 RPPIANDENA QNLSTVNSSH SSELSKANLV DVEKCIQDPL LQIFPTVEDP DRFVFSIDPK 120
  121 SPLIAVNWPF RKKLKITCVY SYVALCSTFA SSVFSVPAEA ITTIFHISLT VSLLTMTVFL 180
  181 CGYIAGPIVW APLSELSGRK LPLLIGMFGF GIFNISVAVA KDIQTIMMCR FFSGFFASAP 240
  241 LTVVAAAFAD MYSNKHRGTA ITIFAALVFD GPLVSPIIGG FLTKSYLGWR WTEYITSFMG 300
  301 FFALVIVYLF CDETYSKAII RNKAKEYRAM SGNYFVHAKS EEEVLTVPDV AKNYLLVPMK 360
  361 LLFTEPIVFL ITLYSSFVYA ILYLLLEAYP IIFSEKRHFS MGVAELPYIG LLVGVFIGSA 420
  421 INISFEPWYY RRCLALGGKP DPEARLPPMM IGCFMFPAGI FWLSWSGYYS YVHWIVPTLS 480
  481 GLATGCGILL IFLQCLNYLI DAYLFRAASA VAANTIMRSA MAAGFPLFAV QMFHNMGVGW 540
  541 AGSLLGFIAV ALIPMPFAFF FFGRKIREKS KMAVVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] deduced N/A No confident structure predictions are available.
    2 View Details [115..576] PSI-BLAST 36.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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