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Protein Overview: SPBC146.06c

General Information:
Name(s) found: SPBC146.06c [Sanger Pombe]
Description(s) found:
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  • pir||T39420 conserved hypothetical protein SPBC146.06c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626358|sp|Q9Y804.1|MTMRF_SCHPO RecName: Full=Protein MTMR15 homolog [NCBI NR]
  • gi|5441488|emb|CAB46759.1| VRR-NUC nuclease associated domain, human MTMR15 homolog [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112187|ref|NP_595395.1| human MTMR15 homolog [Schizosaccharomyces pombe] [NCBI NR]
  • human MTMR15 homolog [Sanger Pombe]
  • Protein MTMR15 homolog OS=Schizosaccharomyces pombe GN=SPBC146.06c PE=2 SV=1 [Swiss-Prot]
  • CONSERVED PROTEIN; SIMILAR TO O SATIVA Q9LWI8; ARABIDOPSIS THALIANA F11A17.9; HUMAN KIAA1018 AND C ELEGANS C01G5.8; HAS CONSERVED MOTIFS AT C TERMINAL ONE- DY{K/R}{S/G}.PDL..W{.}EVK...D{R/Q}LS{EHT}.Q..W{I?L}..{L/ F}.VE{I/V}C{K/HV; NO APPARENT S. CEREVI [pompepVF.fasta]
  • CONSERVED HYPOTHETICAL PROTEIN; SIMILAR TO O SATIVA Q9LWI8; ARABIDOPSIS THALIANA F11A17.9; HUMAN KIAA1018 AND C ELEGANS C01G5.8; HAS CONSERVED MOTIFS AT C TERMINAL ONE : DY{K/R}{S/G}.PDL..W{.}EVK...D{R/Q}LS{EHT}.Q..W{I?L}..{L/ F}.VE{I/V}C{K/HV: Q9Y80 [pompepV13]
  • Conserved hypothetical protein [pompep4896]
  • |||conserved protein [pompepnew.fasta]
  • SPBC146.06c protein [4896.FASTAC]
  • |||conserved protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • conserved hypothetical protein [Schizosaccharomyces pombe]gi|5441488|emb|CAB46759.1| SPBC146.06c [Schizosaccharomyces pombe]gi|7490309|pir||T39420 conserved hypothetical protein SPBC146.06c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9Y804) Conserved hypothetical protein [pompep4896_normal_reversed]
  • |||VRR-NUC nuclease associated domain, human MTMR15 homolog|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC146.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC146.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • human MTMR15 homolog [Schizosaccharomyces pombe] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: nuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFFNEACD INTPDKSGVN ENKLCFPPLK VVCQAPETTV KGQVANTNKH NVYSTKNSMY  60
   61 LLGFEEILNT VLDCEPHIFT DDELRVIENF KALDSDERYL FVRLFMRKRN KWFRVGHLTY 120
  121 PDCKDVIACC KQLVLKNFFE DESLMSTEEI IEILSLDELR SLARQTKVCG KSRSEISKEI 180
  181 IFLSKRQSVL HCNGQQFLSF DAFGVMHKQE SFLRKQLLYQ CKSCVKPKKI LVDLFHRINI 240
  241 VYFRSSIYDE QSLTSLILAR LNKFSYPNYV LSRTSNVFNC RAQCLEYVEV LELSKNLVPI 300
  301 FENTAASDKE ALEQALNSFF EIYPIWSTYL NEDIREFWVE ENRKVDTRLV RFSFSFRPGA 360
  361 VYTYLIHKSL NILAKSRLVE VEHEILDTLL SQNIYLVGKR GHWYNRKALL EYNFKTEDTN 420
  421 VLRYWKTLAL STCENGIEDK YTHLRYYFSL QRRLVRLRKC LKVSNTTELK SMKLINNNPS 480
  481 RLFLHGERIH NGDLSNRTVW RSKTNNAITV EELALQHYQS IGWEGIHAES SILLTLFALT 540
  541 FWDILFEDVP GVFQSPFQSA PLDLHTDSFY ISRESTIMKR LEEIRNGKAG LIIKDNYIRE 600
  601 HQRKTFCVGL NWSYTCEMLL EIVDCINDNG LAQIFLALTQ DYKNSSSGIP DLCLWNPSKK 660
  661 KFMFSEVKSD NDRLSEAQKF WISLLISSEV DVEVCHVSMH KKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] MSA 1.019975 View MSA. No confident structure predictions are available.
    2 View Details [142..366] deduced N/A No confident structure predictions are available.
    3 View Details [367..492] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [493..703] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle