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Protein Overview: slu7

General Information:
Name(s) found: slu7 / SPBC365.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • splicing factor Slu7 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spliceosomal complex [ISSLink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    generation of catalytic spliceosome for second transesterification step [ISSLink to PubMed article]
    Molecular Function: second spliceosomal transesterification activity [ISSLink to PubMed article]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYMNNTFQS NYDYSKDKNF MSTDIGPSMR EMKAQKRRSR PMDNPDADNP YIPKFISTAP  60
   61 WYAQDDDAVE RLAHQRIGKK ETPSGGRSSI EGSWYVRGKK LGPAATKYRK GACENCGAMS 120
  121 HKVKDCMERP RKRGARWTGE DIQADEVIQD INVSWDAKRD RWNGYDATDY KKVIERYEKL 180
  181 DELQNKGEEN RDASENSAVK ASRNSTVSGS EDSASITTPS LRMREDVVAY LRADNKNLQY 240
  241 EPKSRSMRDE TGYHMVDDSS GGAGFVKASG GEKEDFEKLQ MFAWEAERSG TRVHVVANPT 300
  301 AGELEFRKNK ASRMTTQKHI DQSILDRYGD GTSKVKDKKA KNNEKEVPDL AILDKSEKSK 360
  361 GESNTDEESE NLVIVEGDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] MSA 2.016966 View MSA. No confident structure predictions are available.
    2 View Details [218..289] deduced N/A No confident structure predictions are available.
    3 View Details [290..379] MSA 1.015992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle