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Protein Overview: vps1302

General Information:
Name(s) found: vps1302 / SPBC16C6.02c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • chorein homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 3131 amino acids

    Gene Ontology:
    Cellular Component: endosome [ISSLink to PubMed article]
    Biological Process: protein retention in Golgi apparatus [ISSLink to PubMed article]
    late endosome to vacuole transport [ISSLink to PubMed article]
    intracellular protein transport [ICLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEGLLANFL NRLLGEYIEN FDATQLKVAV WNGDVTLRNL QLKRSAFRKL ELPISVQYGL  60
   61 VEELTLKIPW SSLKNKPVEI YIVGIRALAS MEENVKSQSE VDPHQVLESK RRQMQLWEAS 120
  121 QIGKAETAYD PKTQTFTESL ITRMIDNIQI NIRDIHIRFE HLPVSNVVPG GYSFGLLLSE 180
  181 FSIESCNEEW TSTFVETESQ TIYKLCSLRG FGIYSDETAE CIDKTDINEL MNTFQALITD 240
  241 FQSREKDYII APVTGMAKVT INKLPTPEIP RFLSQISFRG FDVSLNDSQI SCGMSLAHEL 300
  301 QDVMSKLAFR KRIVGNVSLD TPLDYLRFIF QKTLHDIQQK HYARSWPAIK AFCEKRRNYI 360
  361 KLYKKKFLAV QLSADESKEL DVLELNLDIS QLKLFRSLAY QEIKNEGFEP QPPKQQGWGS 420
  421 WMWNSFRGAS DENGEVTDDQ RKTVIDAIGL NDSIIESAHV GDLQSNTSLF DVRLEVPSGK 480
  481 FSLLKYPKKE NVISLELLNF FSQFKCNKKD YSFVANLGSL KMYNDDRNFL YPRETSNKEI 540
  541 ETTSPSIFTL SFERSSSDDN DTDTLGINLR ALEFFYDPNL LLRVKGFQSS LFANDNGRKL 600
  601 VRLANDAVTD FTSQTVQNLQ EYLNEKRKLN VNFQFQTPLL IFPEDCNNPE SFSLFVDAGF 660
  661 ISITSQNVET NDKESNSESE TLYHLIYDRY RVSLESARLL LGPLNELKNE SNKINEEYYL 720
  721 MNELNTEIFI QAQRVPTPQY PRIKVEGNMP CLSFILSDAQ FRILNNLAST MLKDGKASDD 780
  781 DDNGDWRPES SESLDSHESE YKLNNTPSEQ SVKVSHFFEF NMKLGEVTLI LCREDSQTKR 840
  841 NSMVSVNFAK LLLSFNQFED NSHLRMSINS FHINDMLSKS SRDNNRQLMR CYAPDSVDAE 900
  901 NTPVIVEIKS VKAGENQSET NTTVDFLCAN GDFYLAKFSI LTLIEFLPSF APPPSNDKQS 960
  961 TPQVSNSAAG KMELNFKIHK IGLRLLENYE SKPICIDLLA LDLSVNSTKG ISEVESRVDK1020
 1021 IQVMAWDHEK DEIVTLIDSK QDSLFDLKCK MQEGWFIHSP NPSTDVNIKM GSFTMLCHKQ1080
 1081 PIEEILNYAS NFGHYKAIVQ SVKYLAETGT HQVQQGTNVN INLYISNPIF QIPLTLENGS1140
 1141 SAMVEILPGS FSLKTPSWLP NLTLNLESKS TTLRTIYYSK DFDEKGNQIT VLDDLNISLD1200
 1201 GSIVQAVDSA ITNYAIDLHC GISELLIHLS QAQYLILLKL ASNLPEMLSI ANAFSANVDA1260
 1261 PSVMTLLSEE LYSIDTVNDA ISNLSQNSSF DMKFGLHFPK ISLNLYDGTF ITPENSLSPL1320
 1321 SNFTLNEIRA EGSYDLKTGA SALIKMASLA IEDVRSEKSR YFSNVIIPST DTESQLQVSF1380
 1381 QYKPDTSSIL LEGDIFKSMY VLSLDHLLSI YYWFGQPLME KKLESPDDVQ SLQAESSVST1440
 1441 PAVTAASEKS ISLSVRFDIR NTSLVFVADA SKSTSQAIVL RTDQISLVKQ LSYSLTVQKM1500
 1501 GMFVTRMDKL DDGIQILDDF DIGFGLVQDC SENKSFSATL DLDRLLFRIS VYDLLLLQSI1560
 1561 AQASVSVISS YKDKSSSISE NMNSGDYGQQ ILNASNIAAV QQKAEQTATT LLTVLGHDSL1620
 1621 ISEEFTINSA GIQLILISDA HCLPVFDFTI ENFNVLVKDW STNLSATTSL TLHCNAFNFA1680
 1681 KSHWEPVIEP WTFSTTAIMK DGMHEVNINS DDIAQISLTP MMVTDVHRLI KFYLTNQENN1740
 1741 IEKRPEGYPY VILNQTGYNL SIQYGNLNSS EMQSLSLPSG KCVPCRFESK EVLTSRMSSK1800
 1801 VQDVATKVRV SFDSTWYPVD EVSVHQEGSF LYELKPRIDQ RTFLLVTVVL LESNIKQIIL1860
 1861 SSPYSIVNRT KEVIEVVCND RSGHRQSSVI KIDPNETGYV PLDLACLYPL RIRPVSKLGF1920
 1921 LWSNQIVDWH SLNKSPLQYL TCESTSTSWK HNLLVFARNL MDGSLQNDYP FLQLNILPTL1980
 1981 QIENLLPYEI NLRIIERSSG NDWRSSLSPG DSLPILHTDS KSFLLMGINV PDLDLQPVDL2040
 2041 PIIYTPISSG QDVQTSALLT ASDKQDVVKL ILKYEKLPGT NYVSKVMIYP PYVIFNHTDL2100
 2101 SIQVTSSSPN SIRYTIPSGS YSNDIKPYFY SFDESGRKNR AMISIDNGTS WSADIGFDTL2160
 2161 GSSSQVEVRK TNESDVCLLG MSISESSGKF CLTKSVTFTP RFVFKNHLDC TVSLREFGSS2220
 2221 KVLHLPSNEL IPMMYFSNPQ EIALLLSLPS SNNHWTSPFL AQNVGIVHLK AFEFDDDDNN2280
 2281 MSTTLLRLCV TLEDATFFVT ITKEDKAWPF RLKNCTSREI CYEQKRPDPE SVDSRFLQGS2340
 2341 RSMKYALNPG EEANYSWDFP ILKSKLLQVE VGKAIHDLDI SSVGQLEPWH PTELDQKIRI2400
 2401 HPEVKVDSLT SLVTFNEIDL SKPKLPSRTN SNVKGSIVEQ KFKLVLQLKG FGISLIDKKY2460
 2461 EEFAYATLKN FTFRFDDSKD LNTFGMSLGW LQIDNQMLDS VYPIALFPTM ITQEVKQDDP2520
 2521 QLLQLRFSVL KDSSFNILYI KYASLLLQEL SLEVEDRLVL TLLQLLYPSS DVSKDSASLS2580
 2581 KNAFADKFEI PDLDADVYRS NVFFETLHLQ PTRLNISFET SYESDQPAVK SSNPTLDFMT2640
 2641 GILISTLGNI HDAPVQLNSI LLENARGTLS EMANRVASHY KQQVGYQIYK IAGRADFLGN2700
 2701 PVGLFNNVAS GVFDMFYEPY QGFLLQDSQS FGDSFARGTS SFMRKTIYGV SDSVSKITGT2760
 2761 ISKGLSTMTM DPKYQNSRRR FRSRNRPKEA VYGVTAGANS FYDSMSSGFK GLKKPFTDPK2820
 2821 NNSAGKFLKG FGKGMLGLAT KPAIGLLDMT SNVSEGIRNS TDVRTNPEID KVRVPRYVEF2880
 2881 GGLIVPFKPY ESLGKYMLSC LDDGKYAFDE YLYHAEIQNV DILYISTKHF IITGSNYIVK2940
 2941 IAVPVKQISG LRVSEHDLNS SCLFTFAVFW QRCESLFDCE YLSTPNLELF VKEKKKPIMS3000
 3001 ITMSDSSAYG EELMRERFEH LLKAYEKMAL MVAEQEEFNA KIEDMALKLL SEKYDNEAYQ3060
 3061 AELFYRLSNC VEKVLHNKIS ITDLKTEYEE ILEQTLKKEC KAYERSCIEN VKLKKRTEQA3120
 3121 TAYYASSSSE P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run spc19 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

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