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Protein Overview: SPBC27B12.04c

General Information:
Name(s) found: SPBC27B12.04c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • conserved eukaryotic protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 817 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole [IDALink to PubMed article]
    Biological Process: signal transduction [ISS]
    cell cycle process [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTASCIS FSQFQRLKKL IDSPASKHKP MEFKGTSKDD LEDDLNSFFD CEEELFLSAN  60
   61 KIFYSKLRVY QTVRHWSLKQ NWSSMSLDQK RNFILHCHHE LSSGELLRNS ALYSILYIAA 120
  121 GAYDSVGSFE EHVHSISENV YLLREFDIPK TVYSLFIEWN RTRKHSFLDN SRDEGFLNLL 180
  181 LSLMFFFLTL NNTDKTWIHS IRSLNPPVLP TLVKLFIDIT SDYQLNLDKV IHSSLKKLSF 240
  241 LIFKVCIRLW GSQSYLQEKK AGLAEVLNIS TSQQKPKTTA LDYEVFRHEM ATKFSSFADS 300
  301 YYPVPLDREQ AHILPTLNTD SFHKSSFISS TRLCSPENPS LLVNTAKTSK MSARREQFQT 360
  361 NQNLPFCFTP NLEKLTIPYS VTEAANVFQN KTKRTLAVEQ LLSERELLRR FTLQQRLVAD 420
  421 LHEFYNSVKG PAHSFETEDP VLKFVSQSYD DLFPYMDNFI QLAVQLFYHI SKKVNCLYVE 480
  481 AFSSSDAVLQ RIQDNAVVDS PTEELSEQAA RNRKSNVKIE YTEDFATGFA ISGEISHSIN 540
  541 NLEFVLYSLS SLFLMMLKWF RLSHVLRFER LAFLLYENHF LEIFNRHLTE GDCNRNTEKD 600
  601 VKCVRGGFFS YSSKMYKYDR VSIPVITRAS SSRNLLITMN CLRVLEKVCK YSNIRKEIIA 660
  661 RSNLHENLKK LLAIPHDKLR LYALKVLKLS VPFLGLKWKQ ANMSIITQIY LNCSLDLRDS 720
  721 WMFHENGSDT YRSAQLQETF LAILIRFYHI RLYGKKCKSL YQFCILEEMR LKKSIEELAA 780
  781 SNMMEYIPES LWSYSFERSD TGFFENEFAA MHINDIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] MSA 2.03798 View MSA. No confident structure predictions are available.
    2 View Details [174..313] deduced N/A No confident structure predictions are available.
    3 View Details [314..423] deduced N/A No confident structure predictions are available.
    4 View Details [424..536] deduced N/A No confident structure predictions are available.
    5 View Details [537..728] MSA 1.038962 View MSA. No confident structure predictions are available.
    6 View Details [729..817] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle