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Protein Overview: SPBC23E6.02

General Information:
Name(s) found: SPBC23E6.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ATP-dependent DNA helicase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1040 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ISSLink to PubMed article]
    chromatin remodeling complex [ISSLink to PubMed article]
    Biological Process: DNA repair [ISSLink to PubMed article]
    chromatin remodeling [ISSLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    DNA binding [IEA]
    ATP binding [IEA]
    zinc ion binding [ISSLink to PubMed article]
    ATP-dependent DNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNNTAFEQF TLNPCEQIPL DDKHNIGFNK NNTPDYSSSA SSDQLLKNDI NRHEMERRIA  60
   61 FLNRKQALFN AFMHDSSSSL NTMESNIEKV NGLFPNDNSV IALKPNEEKL NSSLSVENND 120
  121 STYTDATLIA PKIGLDRPNI NAITIDVDGH SLQNEISSST DKLSPSQSDA LFEQKQDSLF 180
  181 WNDNAVIVVS DSESDDNNVR TKSSLNDHDK VNMKEKRNLE LAFMNSKRKK LELPSLPVLS 240
  241 TAGPSYTNSL ALPPFHHHNN YKMFNTTHTL EDDKFLQGKG TSNNPISLSD EEDNEINFQN 300
  301 KRYGSDSVIL PGGLLHDSKL PEPGKHLFHL QWYHDRFHNI EGFNLSDSNN QKVQDDQQQQ 360
  361 LEELFKDLDE QLVNDPTIRE GTPAGLIPTL MEHQKEGLMW LKRLEESSKK GGILADDMGL 420
  421 GKTVQALALL VTRPPESKSV KTTLIITPVS LLQQWHNEIL TKIAPSHRPT VYIHHGSSKK 480
  481 HKIAEQLMSY DIVLTTYNVI AYEFKNKMAY DKSIEDNAPI KKFEHLPFFE AEWYRVILDE 540
  541 AQTIKNRNTL AARGCCLLES TYRWCLSGTP MQNGVEEFYS LIKFLRIKPY SDWSSFSKDF 600
  601 TIPLSSNINT SAPMKRFRGL LKAVLLRRTK NTKIDGKPIL TLPPKTAVKS ETDLSSSEME 660
  661 FYNTLQSGAQ IQMRKYLQEG TITTHYGSLL VLLLRLRQAC CHPWLIVARE AAVDDNDSFQ 720
  721 AKNRAIYNQI YPEAVNRLKL IETLQCSLCM DVVAELLIIV PCGHFLCREC LTHVITSSED 780
  781 MAKQTSNENI SPKCSVCEEY IDTERLLSYA LFRRYSGMAP IVDADNKLRT ENISELLPKQ 840
  841 YSNILENRQM GMKIFTDPKH WTTSTKIEKA LNAVKEIIKK QPTDKILIFS QFVSFLELFT 900
  901 VPFRQEGIKY LMYTGGLSTA ERNQALINFE VDPNVRVLLI SLKAGNVGLN LTCANHVIIL 960
  961 DPFWNPYIEE QAVDRAHRIG QDKPVNILRI VTNNTIEERV LALQDRKREL IDSALGEKGL1020
 1021 REISRLNTKE LSFLFGMSSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] deduced N/A No confident structure predictions are available.
    2 View Details [63..129] deduced N/A No confident structure predictions are available.
    3 View Details [130..382] deduced N/A No confident structure predictions are available.
    4 View Details [383..1040] PSI-BLAST 39.69897 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle