YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: mrpl16

General Information:
Name(s) found: mrpl16 / SPBC1105.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • mitochondrial ribosomal protein subunit L16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]
    rRNA binding [IEA]
    peptidyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQQYNKFP FFFSGILGPT RLNGLQMPPI QTMVRWGHQY APRSIRNQKA QKGRVPIPIG  60
   61 GSLRGTQLEW GEYGMRLKDR SIRFHAKQLE TAEQILKRIL KPIKAARVYT RFCCNVPVCV 120
  121 KGNETRMGKG KGAFEYWAAR IPIGRVLFEI GGDGMRKELA EHALKQAAFH LPGKYEIIVK 180
  181 QTPKRLGTTL IHETPITTET SKMNYQEITS TTTAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 37.522879 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.80692012906383 bayes_pls_golite062009
  • structural molecule activity
    		•  9.22985932721781 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  3.83536146028392 bayes_pls_golite062009
  • transferase activity, transferring amino-acyl groups
    		•  0.386783133410145 bayes_pls_golite062009
  • catalytic activity
    		•  0.145440139643068 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle