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Protein Overview: SPBP16F5.05c

General Information:
Name(s) found: SPBP16F5.05c [Sanger Pombe]
Description(s) found:
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  • gi|74665070|sp|Q9HFE7.1|YNW5_SCHPO RecName: Full=Ankyrin repeat-containing protein P16F5.05c [NCBI NR]
  • gi|19112571|ref|NP_595779.1| ribosome biogenesis protein Nop8 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|10185168|emb|CAC08544.1| ribosome biogenesis protein Nop8 [Schizosaccharomyces pombe] [NCBI NR]
  • ribosome biogenesis protein Nop8 [Sanger Pombe]
  • Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe GN=SPBP16F5.05c PE=2 SV=1 [Swiss-Prot]
  • ANKYRIN REPEAT PROTEIN; S. CEREVISIAE YAR1 RELATED PROTEIN: Q9HFE7; [pompepVF.fasta]
  • ANKYRIN REPEAT-CONTAINING YEAST YAR1 RELATED PROTEIN: Q9HFE7; [pompepV13]
  • Ankyrin repeat-containing yeast yar1 related protein [pompep4896]
  • |||ankyrin repeat protein [pompepnew.fasta]
  • SPBP16F5.05c protein [4896.FASTAC]
  • |||ankyrin repeat protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • ankyrin repeat-containing yeast yar1 related protein [Schizosaccharomyces pombe]gi|10185168|emb|CAC08544.1| SPBP16F5.05c [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • (Q9HFE7) Ankyrin repeat-containing yeast yar1 related protein [pompep4896_normal_reversed]
  • |||ribosome biogenesis protein Nop8|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBP16F5.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBP16F5.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||ribosome biogenesis protein Nop8 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP16F5.05c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    preribosome, small subunit precursor [ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDDLIYAC RAADEELLDE IIEKCPQELS RRDENGNSGL HMASANGHIA VVQKIIPYLN  60
   61 KEVINAQNES GNTAMHWAAL NGHAEICKLL LEAGGDPHIK NIYEKSPIYE ADIRNQQKVM 120
  121 DLFLDFEIAK GSEENTGDEE KLEDGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 41.154902 4ank


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle